Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01469 ATGGATCACATTAGTAATGAGGCTAGGGTTTACGGTTTTCCAATTGGTCCTTCAGACATTCTTGGTAGATCAATTGCTTTCAGGGTTCTATTTTGTAAGTCCATGTCACATTTTAAGCACCAGATATTTCATGTGTTGTTAGATCTCTTCTATAAGTTTAGGGGGGGTTTGGCATCCTTTGTATCATGGTTGCATCCTAGGAATCCTCAGGGGATACTGGCAATGATGACAATTATTGCTTTCTTGTTGAAACGATATACAAATGTGAAAGTAAGGGCTGAAATGGCATATAGGAGGAAGTTTTGGAGAAACATGATGAGATCTGCTTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACAACAAAGATGAATGAATCAGACCTTTATGATGTGGAATTGGTGAGGAACAAGCTTCAAGAGCTCCGCCACCGTCGGCAAGAGGGATCTCTTAGAGATATATTTTTTTGTATGCGTGCCGATCTTGTTAGAAATTTAGGTAATATGTGTAATCCTGAACTACACAAGGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAATACATTGATGAAGTAACGACTCAACTGAGAATGGTCTGTGATTCTGATTCAGAGGAGCTATCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGGCATGCATTTGGGAGGACGGCTTTGCTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTCTCATGTGGGTGTAGTTAAAACACTGGTAGAACATAAACTCTTGCCTAGGATAATTGCTGGTTCAAGTGTGGGATCCATTATGTGTGCCGTTGTTGCCACCAGGACTTGGCCTGAGCTTCAGAGCTTTTTTGAAGATTCATGGCACTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTTAAGAGAGTCACGACATTTGGTGCTGTTCATGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTAGAATTCTTGGAATTACAGTTTGTTCCCCAAGGAAACACGAACCACCTAGATGTCTTAACTACTTGACTTCACCCCATGTGGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAAGAATTGATGGCAAAGGATAGAAGTGGGGAAATTATTCCTTACCATCCTCCTTTTAACTTAGGTCCTGAAGAGGGCTCCACACCAGCGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAACTATTCAATGTCAATCATTTTATAGTTAGCCAGGCCAACCCTCATATTGCACCATTATTGAGATTGAAAGAATTTGTGCGGACTTACGGGGGCAACTTTGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAACATAGGTGTAATCAAATACTGGAACTTGGTTTTCCATTAGGTGGACTTGCTAAGTTGTTTGCTCAAGACTGGGAAGGTGATGTGACTGTTGTTATGCCTGCAACTCTTGCTCAGTACACCAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGTACCTGGGAGAAACTTTCAGCCATTAAAGCAAATTGTGGCATTGAGCTTGCCCTTGATGAGTGTGTTGTGATTCTCAATCATATGAGAAGACTTAGGAGAATGGCTGAGAGAGCTGCTTCTGCTTCTCATGGTTTGTCAAGTACTGTCAGGTTTAGTGCTTCAAGAAGAATTCCTTCATGGAATTGCATTGCACGGGAGAATTCGACCGGCTCCCTTGAGGACCTTATTGATGTTGCTTCCTCATTGCATCAAAGCATTAGCAGTTCTAATGTGGCCGGTGGTAAAACTTGGAAGACCCACCGTGGCATACACGAAGGAAGTGACAGTGACTCTGAAAATGTTGATTTGAACTCTTGGACTAGATCTGGTGGGCCTTTGATGAGAACTACTTCGGCAAATATGTTCATTGATTTTCTCCAAAACTTGGAAGTTGACACTGAACCAAATAAAGGCTTAGTGAGTCATGCTAACCCTAATGATTTTCAGTATCGTAACCCCAGGCTCACAACGCTGGATAGGAACTGCGATAGCACAGAATCTGAGCAAAGGGAAATTGGCAACAGGGTGGTCAATGGGTCCCGCATACTGGTGACTGCAGGTGATTTTTTGCAGCCTGAAAGGATCCATAATGGTATTGTGTTTAATGTTGTCAAGAAAGAAGACGTGACACCCTTAAACAGGAGTCATGATTTTGAAAATTTCACCGATGAGGTTGCTGAATGTGTTCAAGATGAGTGTCCAGGGAAGGAGATGGATGCTGCTAGCTCAGCTTCTGAACATGGAGATGATGAATCCACTCCAGCTACGTCCTTAACTGCATCTCCAGATTATACTTCTGTGGACCATCATTCGGGCACAGATTCAAGTATGAATCGGAGCATTGTTGATGGCTAG 2526 0.4283 MDHISNEARVYGFPIGPSDILGRSIAFRVLFCKSMSHFKHQIFHVLLDLFYKFRGGLASFVSWLHPRNPQGILAMMTIIAFLLKRYTNVKVRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDKETTKMNESDLYDVELVRNKLQELRHRRQEGSLRDIFFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRTWPELQSFFEDSWHSLQFFDQMGGIFTVVKRVTTFGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIIPYHPPFNLGPEEGSTPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVVILNHMRRLRRMAERAASASHGLSSTVRFSASRRIPSWNCIARENSTGSLEDLIDVASSLHQSISSSNVAGGKTWKTHRGIHEGSDSDSENVDLNSWTRSGGPLMRTTSANMFIDFLQNLEVDTEPNKGLVSHANPNDFQYRNPRLTTLDRNCDSTESEQREIGNRVVNGSRILVTAGDFLQPERIHNGIVFNVVKKEDVTPLNRSHDFENFTDEVAECVQDECPGKEMDAASSASEHGDDESTPATSLTASPDYTSVDHHSGTDSSMNRSIVDG 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01469 841 SUPERFAMILY FabD/lysophospholipase-like 229 574 IPR016035 -
Phco2g01469 841 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Phco2g01469 841 MobiDBLite consensus disorder prediction 792 841 - -
Phco2g01469 841 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 34 571 - -
Phco2g01469 841 MobiDBLite consensus disorder prediction 804 841 - -
Phco2g01469 841 Gene3D Cytosolic phospholipase A2 catalytic domain 229 309 - -
Phco2g01469 841 CDD Pat_SDP1-like 163 570 - -
Phco2g01469 841 Pfam Patatin-like phospholipase 233 424 IPR002641 GO:0006629
Phco2g01469 841 Gene3D Cytosolic phospholipase A2 catalytic domain 310 496 - -
Phco2g01469 841 Pfam Domain of unknown function (DUF3336) 95 226 IPR021771 GO:0004806|GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01469 Phco-Chr2 44356571 44360830 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01469 2 44356571 44360830 Phco2g01469 2 44356571 44360830 ECH
Phco2g01469 2 44356571 44360830 Phco6g00342 6 3251577 3255152 PCT