Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00338 ATGGGATCCCAAACACAGTCTCAGCTACAAGTTGTAGACTTCACTAACCAAAATCTGAAACCAGGAACACAAACATGGGTTTCAACTTGTGAAGTAGTGCGTGGTGCACTTGAGGATCATGGTGGTTTCTTGGCACTCTATGATAACATCAGTTTGCAGGCATATGACTCTGTTTACTCAGAAATGAACAAACTTTTTGACCTCTCAACAGAAACAAAACGAAGGAAAACCACTGAAAAACCTATATTCAGCTACTCTGGCCAGCGACCTGGGATTCCTTTGTATGAATCTGTAGGTATCGTGAATCCACTGAGCTTTGAGGATTGCCAGAAATACACACATGTTATGTGGCCACAAGGAAATGATCATTTCTGTGAAAGTGTGAATTCCTATGCCAAGAACCTAGTGAAACTTGATCATATTGTGAAGAGAATGATGTTTGAGAGCTATGGAGTGGAGAGGAAGAAACTTGAGTCTTTACTTGACTCAACTGAATATGTTCTTCGAGGCTACAAATACAGAATACCAGAAGTGGGTGAGAGCAATTTGGGAGTGCCTCCTCATTCTGACACTGCTCTTCTAACTATACTGAATCAGAAGGTAGAAGGCTTGGGGGTGAAATTGAAGGATGGGGAATGGTTTGAGGTGGGTGTTTCACCTTCCCTCTATTTGGTAATGGGTGGTGAGGCATTGATGGTATGGAGTAATGACAGAATAGCAGCTTGTGAACACAGAGTTTTAGTGAAGTCAAAGAAAGAAAGATACTCAATGGGACTACTTTCATATGTTAATAAGATAATGGAACCAGAAGAGAAGCTAGTTGATGAGGAACATCCTCTACGTTATAAACCACTAGACCACTACGGATACCTACGTTTCTTTCTCACTGAAGAAGCCTTAAAATCTGATTCCAGAATCAAGGCATACTGTGGTGTTTGA 939 0.4111 MGSQTQSQLQVVDFTNQNLKPGTQTWVSTCEVVRGALEDHGGFLALYDNISLQAYDSVYSEMNKLFDLSTETKRRKTTEKPIFSYSGQRPGIPLYESVGIVNPLSFEDCQKYTHVMWPQGNDHFCESVNSYAKNLVKLDHIVKRMMFESYGVERKKLESLLDSTEYVLRGYKYRIPEVGESNLGVPPHSDTALLTILNQKVEGLGVKLKDGEWFEVGVSPSLYLVMGGEALMVWSNDRIAACEHRVLVKSKKERYSMGLLSYVNKIMEPEEKLVDEEHPLRYKPLDHYGYLRFFLTEEALKSDSRIKAYCGV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00338 312 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Phco6g00338 312 Pfam 2OG-Fe(II) oxygenase superfamily 178 257 IPR044861 -
Phco6g00338 312 SUPERFAMILY Clavaminate synthase-like 8 297 - -
Phco6g00338 312 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 290 - -
Phco6g00338 312 Gene3D - 1 300 IPR027443 -
Phco6g00338 312 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00338 Phco-Chr6 3225397 3228153 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01477 2 44477392 44478665 Phco6g00338 6 3225397 3228153 PCT