Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01477 ATGCAAAGAATCTCCTTCCAAATCAATTATCACATTAAGAGGATTCATTCGAAAAAAATGGGATCTGAGAGTGAAGTGAAGCTTCCAATTATTGACTTCTCCATCGTGGAGTTGGAATCCAATGTTGCAGAGTGGGAATCAGCGAAATCCCAAGTTCAGAAAGCACTTGTAGAGTATGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGCATATTCGAAAAGCCATATTTCTTGAAGTGGACGAGTTATTCAATCTCCCTTTAGAAACCAAGAAACTAGCTGTGTCAAGTAAGCCATACCGTGGTTATGTTGGTCCTCTTCAACTCTATGAGAGCGTAGGAATTGACGATCCTGATGTTTATGAGAAACTGGAAAGTTTGATGAACATCTTATGGCCACAAGGAAAATCAAGTTTTAGCAAAAATCTGCAATTCTTCACTGAGAAAGTGTCAAGGTTGGATCGGATGATTAGGAAGATGTGTTTGGAGAGTCTAGGTGTTGAAAAGTATTTGGATGAGCACATGAACTCAACACATTACCTTGCACGGCTTATCAAGTACACAGCCCCTCAAGCTAATGAACCGAAAGTTGCCATATCAGAGCACACTGATAAGAACATATTCACCATACTATGTCAAAATCAAATTGATGGTTTGGAGATACAGACCAAAAATGGAGAGTGGATCAAATACAAGCCCTCAACCTCAAACAGTTTCGTTGTTGTCACTGGCGACACATTTTATGCATGGACTAATGGGAGGGTGCATACACCGATTCACCGAGTGATGATGACTGGAAATGAAACAAGGTTGACTGTTGGATTATTCACGGTTCCAAAACCAGGGTTCATAATAAAGGCACCAAATGAGCTTGTGACAGAGGAGCACCCTTTGCTTTTCAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTCTTCGCTCTTCTCAGAATACAAACAATGCTCTCAAGGTTTATTGTGGAGTTTGA 990 0.4061 MQRISFQINYHIKRIHSKKMGSESEVKLPIIDFSIVELESNVAEWESAKSQVQKALVEYGCFEAVFDKVPLHIRKAIFLEVDELFNLPLETKKLAVSSKPYRGYVGPLQLYESVGIDDPDVYEKLESLMNILWPQGKSSFSKNLQFFTEKVSRLDRMIRKMCLESLGVEKYLDEHMNSTHYLARLIKYTAPQANEPKVAISEHTDKNIFTILCQNQIDGLEIQTKNGEWIKYKPSTSNSFVVVTGDTFYAWTNGRVHTPIHRVMMTGNETRLTVGLFTVPKPGFIIKAPNELVTEEHPLLFKPFVQSEFMKFLRSSQNTNNALKVYCGV 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01477 329 SUPERFAMILY Clavaminate synthase-like 22 314 - -
Phco2g01477 329 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 21 318 - -
Phco2g01477 329 Coils Coil 35 55 - -
Phco2g01477 329 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 28 311 - -
Phco2g01477 329 Pfam non-haem dioxygenase in morphine synthesis N-terminal 28 108 IPR026992 -
Phco2g01477 329 Gene3D - 5 319 IPR027443 -
Phco2g01477 329 Pfam 2OG-Fe(II) oxygenase superfamily 186 277 IPR044861 -
Phco2g01477 329 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 179 280 IPR005123 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g01477 Phco-Chr2 44477392 44478665 Dispersed/Tandem
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01477 2 44477392 44478665 Phco6g00338 6 3225397 3228153 PCT