Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00314 ATGGTGGGAAGCATCATGGAAGTGGTTTGTAATGAATACTCAAATGGCTCTGTTCAGGCCTGCAATGGTTCAGAGGAGAAGCTTGATGATCTTCGCAGCTTTGTTGGGAAGGCTGATGGTGATCCTTTGAGAATTGTGAGTATTGGTGCTGGTGCTTGGGGCAGTGTTTTTGCTGCTTTGTTGCAAGATACTTTTGGCCAATTCCGCGATAAGGTGCAAATCAGGATATGGAGAAGGCCAGGAAAGACAGTTGATAGAGCAACAGCAAAACACCTCTTTGAAGTTATCAACTCCAGGGAGGATGTATTGAGAAGGTTGATCAGGCGTTGTGCTTATCTGAAATATGTTGAGGCCAGGCTTGGTGATAGGACTCTTCTAGCTGATGAGATTCTGAAAGATGGATTTTGTTTGAACATGATAGATACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACCGAAACAAGGGAAATTTTTGAAGAGATAAGTAAATATTGGAAGGAGAGAATCACAGTGCCTGTGATAATCTCTTTGGCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCCCATATTATAACTCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATTTACAACAAGGAGTATGCCAATGCTCGAATATGTGGAGCTGATAAATGGAGGAAACCTCTAGCAAAGTTCCTACGACAACCACATTTTATTGTCTGGGATAACAGTGACCTTGTCACTCATGAAGTCATGGGTGGCTTGAAAAATGTCTATGCAATTGGTGCAGGTATGGTAGCAGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTATACTTTGCACACTGCACATCAGAGATGATATTCATCACTCACTTGTTGGCTGAAGGACCTGAGAAACTTGCAGGGCCATTATTGGCTGACACTTATGTCACTTTACTAAAAGGTCGTAATGCATGGTATGGCCAGATGCTAGCTAAAGGCGAATTAAGCCCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGGGTGTCTCAGCAGTGGAGGCATTTTTTGAACTTTTGAGCCATTCAAGCCTGAATGTGTTGCACCCAGAAGAACACAAGCTGGTTGCTCCTGTTGAACTTTGCCCCATCCTGAAGACACTGTATAAAATATTGATATCAAGGGAACAGTCGTCATCAGAAGCTATTCTTCAAGCTCTTAGGGATGAAAATCAGAATGATCCTCGTGAACGCATTGAGATTGCACAAACCCATGCTTTCTACATGCCTTCACTTCTTGGACAACCATGA 1395 0.4315 MVGSIMEVVCNEYSNGSVQACNGSEEKLDDLRSFVGKADGDPLRIVSIGAGAWGSVFAALLQDTFGQFRDKVQIRIWRRPGKTVDRATAKHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGADKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEGPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSHSSLNVLHPEEHKLVAPVELCPILKTLYKILISREQSSSEAILQALRDENQNDPRERIEIAQTHAFYMPSLLGQP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00314 464 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 268 292 IPR006168 GO:0006072|GO:0009331|GO:0047952
Phco6g00314 464 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 47 64 IPR006168 GO:0006072|GO:0009331|GO:0047952
Phco6g00314 464 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 25 106 - -
Phco6g00314 464 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 275 436 - -
Phco6g00314 464 Gene3D - 135 271 - -
Phco6g00314 464 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 137 271 - -
Phco6g00314 464 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 249 IPR011128 GO:0016616|GO:0046168|GO:0051287
Phco6g00314 464 Gene3D - 275 436 IPR013328 GO:0016491
Phco6g00314 464 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 41 440 - -
Phco6g00314 464 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 275 423 IPR008927 -
Phco6g00314 464 Gene3D - 25 106 - -
Phco6g00314 464 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 275 425 IPR006109 GO:0005975|GO:0047952
Phco6g00314 464 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 275 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00314 Phco-Chr6 3052144 3056757 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00314 6 3052144 3056757 Phco6g00314 6 3052144 3056757 ECH
Phco2g01497 2 44791933 44795596 Phco6g00314 6 3052144 3056757 PCT