Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01497 ATGGGAGTGGTTCATAATGCATACTCAAATGGAAGTGTTGGTGGTCAGAATTGTAATGGGGTGGAGGAGAAGCTCGATGCTTTGAGGAGGCTTATTGGGAAGGCTGACGGTGATCCTCTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGCTACAAGACACTTATGGTCAATTCAGGGACAAGATACAGATCAGGATATGGAGAAGAGCAGGAAGGGCAGTGGATAGAGGCACTGCTGAACATCTCTTTGAGGTCATCAACTCAAGGGAAGATGTGTTGAGGAGGTTGATCAGGCGTTGTGCATATCTGAAATATGTGGAGGCAAGGCTTGGTGACAGGACCCTCTTTGCTGATGAAATTCTCAAGGATGGTTTTTGCTTGAACATGATTGATACCCCACTTTGTCCTTTGAAGGTGGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTCAATGGTTTGCCTTCTACAGAAACACGTGAGATCTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGGATCACAGTGCCTATAATTATCTCTTTGTCAAAGGGTATAGAGGCTGCATTGAAGCCTGTGCCACATATTATTACTCCCACAAAGATGATTAACCAAGCAACTAGAGTGCCAATGGAGAACATACTCTATCTTGGGGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCAAGAATATGTGGAGCCGAGAAATGGAGAAAACATCTGGCCAAGTTTTTACGACAACCACAATTTATTGTCTGGGATAACAGTGACCTCGTCACACATGAGGTCATGGGTGGTTTGAAAAACGTCTATGCAATTGGAGCTGGAATGGTAGCTGCCCTTACCAATGAGAGTGCCACAAGCAAATCTGTGTACTTTGCACACTGCACATCAGAAATGATATTCATCACTCACTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCGTTACTGGCTGACACTTATGTAACCTTGTTGAAAGGCCGTAACGCTTGGTATGGCCAAATGTTGGCTAAGGGTCAATTAAGACCAGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGTGTGTCTGCAGTGGAAGCATTCTTTGAACTTCTGAGCCAATCTAGCCTGAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTTTGTCCCATCTTGAAGACACTCTACAAAATTTTGATATCACGGGAACAGTCATCACAAGCTATTCTAAAAGCATTGAGGGATGAAAATCTGAATGATCCTCGCGAACGGATTGAGATTGCACAAAGCCATGTTTTCTACAAGCCTTCACTTCTTGGACAGTCCTGA 1383 0.4425 MGVVHNAYSNGSVGGQNCNGVEEKLDALRRLIGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALKPVPHIITPTKMINQATRVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGQLRPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIEIAQSHVFYKPSLLGQS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01497 460 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 272 432 - -
Phco2g01497 460 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 272 IPR036291 -
Phco2g01497 460 Gene3D - 22 103 - -
Phco2g01497 460 Gene3D - 134 268 - -
Phco2g01497 460 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 272 426 IPR006109 GO:0005975|GO:0047952
Phco2g01497 460 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 144 246 IPR011128 GO:0016616|GO:0046168|GO:0051287
Phco2g01497 460 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 38 434 - -
Phco2g01497 460 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 265 289 IPR006168 GO:0006072|GO:0009331|GO:0047952
Phco2g01497 460 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 44 61 IPR006168 GO:0006072|GO:0009331|GO:0047952
Phco2g01497 460 Gene3D - 272 432 IPR013328 GO:0016491
Phco2g01497 460 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 22 103 - -
Phco2g01497 460 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 272 427 IPR008927 -
Phco2g01497 460 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 134 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01497 Phco-Chr2 44791933 44795596 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01497 2 44791933 44795596 Phco2g01497 2 44791933 44795596 ECH
Phco2g01497 2 44791933 44795596 Phco6g00314 6 3052144 3056757 PCT