Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00294 ATGTCTAGCTCAGCAAAAGTTTTGGATCCTGCATTTCAGGGAGTTGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTCCAGCCAGTTCCGTTGCCAAAATCTGATCATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACTCAAGGCAAAGGTGGCGCTTATTTTTATGATTTACATTTCTGGCTTGGAAAAGATACAAGTCAGGATGAGGCTGGAACTGCGGCCATTAAAACTATTGAACTTGATGCTGCTCTTGGAGGGCGTGCAGTGCAGCACAGAGAAATCCAAGGACATGAATCTGACAAGTTTTTGTCATACTTTAAACCATGTATAATACCATTAGCGGGTGGTGTTGCATCTGGGTTTAGTAAACCTGAGGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAGAGGGAAAAGAGTTGTTAGATTGAGACAGATCCCTTTTGCAAGGTCTTCATTGAACCATGATGATGTATTCATAGTCGACACTGAAAGTAAGATATACCAGTTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAAGCTTTGGAAGTTATACAATTACTTAAAGAAAAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGATGATGGGAAGTTAGACACGGAGTCCGACTCAGGTGAGTTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGTGAGGATGATATTATTCCAGAGTCAATTCCTGCTCAGCTTTATAGTATTACTGCCAATGGTGAGGTTAAGCCTGTGGAAGGTGAACTGTCTAAATCATTGTTGGAAAACAACAAATGCTATTTATTGGACTGTGGTGCTGAGATATTTGTCTGGGTTGGCCGTGTAACACAAGTTGAAGAACGAAAAGCAGCCTGCCAAGCCGTTGAGGAGTTTGTTGCAAGCCAAAATAGGCCAAAATCTACTAGGATAACCAGGATTATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACCAATGCAGAGGAAGGAAGAGGAAAAGTTGCAGCACTGCTTAAGCAACAAGGTATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGGTATGGCGAATTAATGGAAATGCCAAGACTGCATTGCCGAAGGAGGAGATTGGTAAATTTTATAGTGGAGATTGTTATATTGTACTGTACACATACCACACCGGAGAGAGGAAAGAAGACTTCTTCTTGTGCTGTTGGTTTGGTAAAGACAGCATCGAGGAGGACCAAACAACGGCTACTCGGTTGGCCAGCACAATGTGTACCTCATTAAAGGGTAGACCTGTACAGGGACGCATATTTGAAGGCAAAGAGCCACCACAATTTGTTGCTCTTTTCCAACCAATGGTGGTACTTAAGGGAGGATTGAGCTCTGGATACAAGAAATTAATAGCAGACAAAGATGCATCAGATGAGACCTACACAGCAGAGTGTATTGCACTTATTCGAATATCTGGAACTTCTGTTCATAACAATAAATCAGTACAAGTTGATGCAGTGCCGTCATCATTGAATTCTACCGAGTGTTTTGTCCTGCAATCTGGCTCTACAGTTTTCACTTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCAGCAAAGGTTGCTGAATTTTTAAGGCCAGGAGTTACTTTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTCTGCCCTAGGAGGAAAACAAACTTACACCAGCAAGAAGGTTGTTAACGAGGTTGTGAGAGATCCACATTTATTCACCATATCATTTAATAAAGCAAAGTTCAAGGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTGTTACCAGAGGATATCCTTGTACTTGACACACATGCAGAAGTGTTTATTTGGGTGGGTAATTCTGTGGAGCCAAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATATGGCTGCATCTCTGGAGGGACTATCTCCACGTGTGCCACTATATAAAGTAACCGAAGGGAATGAACCTTGCTTTTTCACAACATACTTCTCATGGGATCATGCAAAAGCTGTGGTTCAGGGCAACTCATTTCAGAAAAAGGTGGCATTACTCTTCGGGATGGGCCATGCTGTCGAGGATAAGTCAAATGGGTCAAGTCTGGGGGGACCAAGACAAAGAGCTGAAGCTTTGGCTGCCTTATCTAATGCATTTAGTTCATCATCTGAGAAAGCATCCAGTATGACACAAGATAGATTGAATGGGTTAAGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCTGCTTTGAACTCTGCATTTAATTCATCATCTGGGTCAAAGCCTGTAACTCCACCTAAGGGATCTGGAAAAGGTCAAGGATCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCATCAGTTCTTACTGCTGAAAAGAAGAAAACATCACCAGATGGTTCTCCTGTGGCTGGCAGTAGTCCTCTCACTGAAAATAGCCCCACTGTTCTTGCTGCAGAAACCAAAAGTGATTCCTCTGAAGTTGAAGAATCCAAGGAAACAACAGAGGAACTTGCCCCTGAAACTGGTAGCAATGAGGATATGGAACCAAAACAAGAAAACGTGGAGGAGTCAGGTCAAATGACGTTCAGTTATGAACAATTAAAGACTAAATCTGGTATTGATGTGGCTGGGATTGATCTTAAACGGAGAGAGACCTATCTGTCGGACGAGGAGTTCAACACTATATTTGGAATGGGAAAAGAAGCATTTTATAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATTCGAATTGTTCTAG 2931 0.42 MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQTTQGKGGAYFYDLHFWLGKDTSQDEAGTAAIKTIELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLAGGVASGFSKPEEEEFETRLYVCRGKRVVRLRQIPFARSSLNHDDVFIVDTESKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPESIPAQLYSITANGEVKPVEGELSKSLLENNKCYLLDCGAEIFVWVGRVTQVEERKAACQAVEEFVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSASTNAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKIEVWRINGNAKTALPKEEIGKFYSGDCYIVLYTYHTGERKEDFFLCCWFGKDSIEEDQTTATRLASTMCTSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLIADKDASDETYTAECIALIRISGTSVHNNKSVQVDAVPSSLNSTECFVLQSGSTVFTWHGNQCSFEQQQLAAKVAEFLRPGVTLKHAKEGTESSAFWSALGGKQTYTSKKVVNEVVRDPHLFTISFNKAKFKVEEVYNFSQDDLLPEDILVLDTHAEVFIWVGNSVEPKEKQNAFEIGQKYIDMAASLEGLSPRVPLYKVTEGNEPCFFTTYFSWDHAKAVVQGNSFQKKVALLFGMGHAVEDKSNGSSLGGPRQRAEALAALSNAFSSSSEKASSMTQDRLNGLSQGGPRQRAEALAALNSAFNSSSGSKPVTPPKGSGKGQGSQRAAAVAALSSVLTAEKKKTSPDGSPVAGSSPLTENSPTVLAAETKSDSSEVEESKETTEELAPETGSNEDMEPKQENVEESGQMTFSYEQLKTKSGIDVAGIDLKRRETYLSDEEFNTIFGMGKEAFYKLPRWKQDMLKKKFELF 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00294 976 Gene3D Severin 249 360 IPR029006 -
Phco6g00294 976 CDD gelsolin_S3_like 254 344 - -
Phco6g00294 976 CDD gelsolin_S5_like 521 609 - -
Phco6g00294 976 Gene3D Severin 520 614 IPR029006 -
Phco6g00294 976 FunFam Gelsolin 6 131 - -
Phco6g00294 976 FunFam Villin-like 1 615 736 - -
Phco6g00294 976 CDD gelsolin_S2_like 138 232 - -
Phco6g00294 976 SUPERFAMILY Actin depolymerizing proteins 384 529 - -
Phco6g00294 976 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Phco6g00294 976 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Phco6g00294 976 MobiDBLite consensus disorder prediction 804 819 - -
Phco6g00294 976 Gene3D Villin headpiece domain 897 976 IPR036886 GO:0003779|GO:0007010
Phco6g00294 976 Gene3D Severin 5 132 IPR029006 -
Phco6g00294 976 ProSiteProfiles Headpiece (HP) domain profile. 911 976 IPR003128 GO:0003779|GO:0007010
Phco6g00294 976 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Phco6g00294 976 CDD gelsolin_S1_like 12 124 - -
Phco6g00294 976 PANTHER VILLIN 3 966 IPR007122 GO:0051015
Phco6g00294 976 Pfam Villin headpiece domain 941 976 IPR003128 GO:0003779|GO:0007010
Phco6g00294 976 SUPERFAMILY VHP, Villin headpiece domain 906 976 IPR036886 GO:0003779|GO:0007010
Phco6g00294 976 SMART VHP_1 941 976 IPR003128 GO:0003779|GO:0007010
Phco6g00294 976 Gene3D Severin 133 246 IPR029006 -
Phco6g00294 976 CDD gelsolin_S4_like 387 488 - -
Phco6g00294 976 Gene3D Severin 390 519 IPR029006 -
Phco6g00294 976 FunFam Gelsolin 522 614 - -
Phco6g00294 976 Gene3D Severin 618 736 IPR029006 -
Phco6g00294 976 SUPERFAMILY Actin depolymerizing proteins 512 613 - -
Phco6g00294 976 MobiDBLite consensus disorder prediction 844 876 - -
Phco6g00294 976 Pfam Gelsolin repeat 29 111 IPR007123 -
Phco6g00294 976 Pfam Gelsolin repeat 265 338 IPR007123 -
Phco6g00294 976 Pfam Gelsolin repeat 535 584 IPR007123 -
Phco6g00294 976 Pfam Gelsolin repeat 153 217 IPR007123 -
Phco6g00294 976 Pfam Gelsolin repeat 412 484 IPR007123 -
Phco6g00294 976 Pfam Gelsolin repeat 636 714 IPR007123 -
Phco6g00294 976 SUPERFAMILY Actin depolymerizing proteins 597 719 - -
Phco6g00294 976 SMART VILL_6 625 720 IPR007122 GO:0051015
Phco6g00294 976 SMART VILL_6 252 345 IPR007122 GO:0051015
Phco6g00294 976 SMART VILL_6 19 117 IPR007122 GO:0051015
Phco6g00294 976 SMART VILL_6 393 491 IPR007122 GO:0051015
Phco6g00294 976 SMART VILL_6 521 608 IPR007122 GO:0051015
Phco6g00294 976 SMART VILL_6 139 234 IPR007122 GO:0051015
Phco6g00294 976 MobiDBLite consensus disorder prediction 877 908 - -
Phco6g00294 976 MobiDBLite consensus disorder prediction 775 915 - -
Phco6g00294 976 PRINTS Gelsolin family signature 534 554 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 594 613 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 675 694 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 646 668 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 324 345 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 471 491 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 438 456 IPR007122 GO:0051015
Phco6g00294 976 PRINTS Gelsolin family signature 412 428 IPR007122 GO:0051015
Phco6g00294 976 FunFam Villin-like 1 132 247 - -
Phco6g00294 976 MobiDBLite consensus disorder prediction 775 791 - -
Phco6g00294 976 FunFam Villin-4 248 355 - -
Phco6g00294 976 CDD gelsolin_S6_like 623 721 - -
Phco6g00294 976 FunFam Villin-4 386 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00294 Phco-Chr6 2868210 2878740 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00294 6 2868210 2878740 Phco6g00294 6 2868210 2878740 ECH
Phco2g01529 2 45304453 45313744 Phco6g00294 6 2868210 2878740 PCT