Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01529 ATGTCTAGTGCTACGAAAGTGTTGGATCCAGCATTCCAGGGAGTTGGTCAAAAAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAGATCTGAATATGGAAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGGGCTTATTTTTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCAGCCATTAAAACTGTTGAACTTGATGCGTCTCTTGGAGGACGTGCAGTGCAACACAGGGAAATTCAAGGGCATGAATCTGACAAGTGTTTGTCATACTTTAAGCCATGTATAATACCATTAGAGGGTGGTATCGCATCTGGATTTAAAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAGAGGAAAACGAGTTGTCAGAATAAAACAGGTCCCTTTCGCACGGTCTTCGCTGAATCATGATGATGTGTTCATCCTAGATACTCAGAATAAGATTTATCAATTCAATGGTGCTAACTCCAATATCCAGGAAAGAGCCAAGGCTCTGGAAGTTATTCAGTTGTTGAAGGAAAAGTATCATGAAGGCAAATGCGATGTTGCAATTGTTGATGATGGCAAGCTGGATACCGAGTCAGACTCAGGAGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATTAGTGAGGATGATATTGTCCCAGAGGCCATTCCTGCTCAACTTTATAGTATTGCTGATGGTGAGGTCAAGCCTGTAGAAGGTGAACTTTCAAAATCACTGTTGGAGAACTACAAATGCTATCTATTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAAAGAAAAGCAGCATGTCAAGCAGCTGAGGAGTTTGTTGCAAGTCAAAAAAGGCCAAAATCTACAAGGATTACCAGAATTATTCAAGGTTATGAAACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCCGGGTCTGCTTCTACCAGTGCTGATGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATTGGTGTGAAAGGGGCGGCTAAAAGTACCCCAGTTGTTGAAGAAATTCCACCTTTGCTTGAAGGAGGCGGAAAGATGGAGGTATGGCAAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAGGATATTGGTAAATTATATAGTGGAGATTGTTACATTGTTCTATACACTTATCACTCTAGCGAGAGGAAGGAAGACTACTACTTGTGCAGTTGGTTTGGAAAAGACAGTACTGAGGAGGACCAAAGGATGGCTATTCGATTGGCTAATACAATGTTCAATTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGATGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCAACCAATGGTGGTCCTCAAGGGAGGCTTGAGTTCTGGTTACAAAAAATTTATAGCAGACAAAGGCTTGCCAGATGACACATACACACCAGACAGTGTTGCACTTATTCGAATTTCAGGAACATCCCCTCATAATAATAAAGTGGTGCAAGTAGATGCAATTGCGGCATCGTTGAATTCTACCGAATGTTTTGTTTTGCAATCTGGCTCAGCTGTTTTTACTTGGCATGGGAATCAATGTTCCCTTGAGCAGCAGCATCTTGCAACAAAAGTTGCTGAATTTTTAAAGCCAGGAGTTGCTCTAAAGCTTGCTAAAGAAGGAACAGAAACCTCAGCTTTCTGGTTTGCAGTTGGGGGGAAACAAAGTTACACAAACAAAAAAGCCACTAATGACATTGTCCGAGACGCACATTTGTTCACTTTCTCTTTCAATAGAGGAAAGTTACAGGTAGAGGAGGTTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATCCTCATACTTGACGCGCACGCAGAAGTTTTCGTTTGGATTGGTCAGTGTGTGGATCCAAGAGAAAAGCAAAATGCATTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTGGATGGACTGTCTCCTCAAGTTCCACTATATAAAGTAACAGAAGGGAATGAACCGTGCTTTTTCACTGCATACTTTTCTTGGGATCATGCAAAAGCTTTGGTTCCGGGGAACTCCTTCCAGAAAAAGGTGACATTACTCTTTGGGATTGGCCATGCTCTAGAGGAAAAGTCTAATGGGTCAAGTCAAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAATAGCGCATTCAAGTCATCTCCTGAGGCAGCAGCTAGTGCGGACAAGTTAAATGGGCTAAATCAAGGAGGGCCAAGACAAAGGGCTGAAGCCTTAGCAGCCTTAAACTCTGCATTTAATTCATCATCTGGAGCCAAAATTTATACACCTAGGTCGTCTGGAAGAAGTCAGGGATCACAGAGAGCAGCAGCAGTAGCTGCTCTTTCTTCAGTTCTTACTGCTGAAAAGAAGAAAACTTCACCTGAAACTTCTCCTGTGGCAAGCACTAGTCCTGTTGTGGAAAATAGTAACTTCGGTGAGAAACATAGCCCAATTCCAGATACTAAAAGTGAGAGTGCCCCTTCTGAAACGGATGTTGTTGAAGAAGTTGTTCCGGAAGTCAAGGAGACAGAAGAATTTGCCACTGAAACTGGCACAAATGGGAATTCAGAACCAAAACAAGAAAATGTGGATAATGGAGGAAATGACAGTGAAAACAATCAAAATGTCTTCAGTTATGAGCAACTAAAGACTAAATCTGGTAGTGTTGTGTCTGGAATTGATCTTAAACGGAGAGAGGCCTATCTGTCAGAGAAAGAGTTCGAAACTGTATTTGGAATGAGCAAAGAGGCATTCACTAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAGGAAAGTGGATCTGTTCTAG 2973 0.4201 MSSATKVLDPAFQGVGQKVGTEIWRIENFQPVPLPRSEYGKFYMGDSYIILQTTQGKGGAYFYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQHREIQGHESDKCLSYFKPCIIPLEGGIASGFKKPEEEEFETRLYVCRGKRVVRIKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPEAIPAQLYSIADGEVKPVEGELSKSLLENYKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQKRPKSTRITRIIQGYETHSFKSNFDSWPSGSASTSADEGRGKVAALLKQQGIGVKGAAKSTPVVEEIPPLLEGGGKMEVWQINGSAKTPLPKEDIGKLYSGDCYIVLYTYHSSERKEDYYLCSWFGKDSTEEDQRMAIRLANTMFNSLKGRPVQGRIFDGKEPPQFIALFQPMVVLKGGLSSGYKKFIADKGLPDDTYTPDSVALIRISGTSPHNNKVVQVDAIAASLNSTECFVLQSGSAVFTWHGNQCSLEQQHLATKVAEFLKPGVALKLAKEGTETSAFWFAVGGKQSYTNKKATNDIVRDAHLFTFSFNRGKLQVEEVYNFSQDDLLTEDILILDAHAEVFVWIGQCVDPREKQNAFEIAQKYIDKAASLDGLSPQVPLYKVTEGNEPCFFTAYFSWDHAKALVPGNSFQKKVTLLFGIGHALEEKSNGSSQGGPRQRAEALAALNSAFKSSPEAAASADKLNGLNQGGPRQRAEALAALNSAFNSSSGAKIYTPRSSGRSQGSQRAAAVAALSSVLTAEKKKTSPETSPVASTSPVVENSNFGEKHSPIPDTKSESAPSETDVVEEVVPEVKETEEFATETGTNGNSEPKQENVDNGGNDSENNQNVFSYEQLKTKSGSVVSGIDLKRREAYLSEKEFETVFGMSKEAFTKLPRWKQDMLKRKVDLF 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01529 990 Gene3D Severin 247 358 IPR029006 -
Phco2g01529 990 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Phco2g01529 990 FunFam Gelsolin 6 131 - -
Phco2g01529 990 MobiDBLite consensus disorder prediction 840 932 - -
Phco2g01529 990 SUPERFAMILY VHP, Villin headpiece domain 917 990 IPR036886 GO:0003779|GO:0007010
Phco2g01529 990 CDD gelsolin_S2_like 139 232 - -
Phco2g01529 990 CDD gelsolin_S3_like 254 343 - -
Phco2g01529 990 ProSiteProfiles Headpiece (HP) domain profile. 925 990 IPR003128 GO:0003779|GO:0007010
Phco2g01529 990 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Phco2g01529 990 CDD gelsolin_S1_like 12 124 - -
Phco2g01529 990 SMART VHP_1 955 990 IPR003128 GO:0003779|GO:0007010
Phco2g01529 990 FunFam Villin-4 248 354 - -
Phco2g01529 990 Pfam Villin headpiece domain 955 990 IPR003128 GO:0003779|GO:0007010
Phco2g01529 990 Gene3D Severin 388 522 IPR029006 -
Phco2g01529 990 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Phco2g01529 990 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Phco2g01529 990 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Phco2g01529 990 FunFam Gelsolin 518 613 - -
Phco2g01529 990 SUPERFAMILY Actin depolymerizing proteins 382 530 - -
Phco2g01529 990 MobiDBLite consensus disorder prediction 840 880 - -
Phco2g01529 990 FunFam Villin-like 1 132 247 - -
Phco2g01529 990 Gene3D Severin 523 612 IPR029006 -
Phco2g01529 990 CDD gelsolin_S5_like 518 609 - -
Phco2g01529 990 PANTHER VILLIN 4 980 IPR007122 GO:0051015
Phco2g01529 990 Gene3D Villin headpiece domain 913 990 IPR036886 GO:0003779|GO:0007010
Phco2g01529 990 MobiDBLite consensus disorder prediction 901 932 - -
Phco2g01529 990 SMART VILL_6 518 607 IPR007122 GO:0051015
Phco2g01529 990 SMART VILL_6 624 719 IPR007122 GO:0051015
Phco2g01529 990 SMART VILL_6 392 490 IPR007122 GO:0051015
Phco2g01529 990 SMART VILL_6 139 234 IPR007122 GO:0051015
Phco2g01529 990 SMART VILL_6 251 344 IPR007122 GO:0051015
Phco2g01529 990 SMART VILL_6 19 117 IPR007122 GO:0051015
Phco2g01529 990 SUPERFAMILY Actin depolymerizing proteins 519 612 - -
Phco2g01529 990 CDD gelsolin_S4_like 386 487 - -
Phco2g01529 990 Gene3D Severin 5 132 IPR029006 -
Phco2g01529 990 Gene3D Severin 133 246 IPR029006 -
Phco2g01529 990 Gene3D Severin 613 729 IPR029006 -
Phco2g01529 990 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Phco2g01529 990 CDD gelsolin_S6_like 624 720 - -
Phco2g01529 990 Pfam Gelsolin repeat 638 713 IPR007123 -
Phco2g01529 990 Pfam Gelsolin repeat 29 108 IPR007123 -
Phco2g01529 990 Pfam Gelsolin repeat 405 484 IPR007123 -
Phco2g01529 990 Pfam Gelsolin repeat 150 217 IPR007123 -
Phco2g01529 990 Pfam Gelsolin repeat 264 337 IPR007123 -
Phco2g01529 990 Pfam Gelsolin repeat 532 583 IPR007123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01529 Phco-Chr2 45304453 45313744 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01529 2 45304453 45313744 Phco6g00294 6 2868210 2878740 PCT