Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00285 ATGTACATTTTGAAACATGTAGAGTCTTCAATTAAGTGTTCAAACATGACGGTCACACCTATGATCTCCATTAATGATGGGAACCTGGTGGTTCATGGCAAGATCATACTGAGTGGAGTGCCAGACAACATTGTCCTAACTCCAGGAACTGGAAAGGGCCTTGTGACAGGTGCATTTATTGGTGCCACTGCTTCCAACAGCAAAAGTCTCCATGTCTTTCCCTTGGGTGTCTTAGAGGATCTCCGGTTCTTGAGTTGTTTCCGGTTTAAGTTATGGTGGATGACTCACAGAGTGGGAACCTGTGGGAGGGATGTCCCATTGGAGACTCAATTCATGCTTATCGAGAGCAAAGACAGTAAAGATTATCAAGAGAATTCTCTAACCGTTTATACTGTTCTGCTTCCTCTCCTGGAAGGCCAGTTCCGTGCTGTTCTACAAGGCAATGACAAAAACGAGATAGAGATTTCCCTTGAGAGTGGAGATCCTGCTGTTCAGACCAAACACGGCCTTCACTTGGTCTACATGCATGCTGGTACCAACCCCTTTGAAGTCATCAACCAAGCTGTCAAGGCTGTAGAAAAACATATGCAAACTTTCAGTCACCGTGAGAAGAAAAAATTGCCATCTTTTTTTGACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGACGTCACAGCTGAGGGTGTTGAGGAAGGCCTCAAAAGCCTATCAGGGGGAGGTACATGTCCAAGGTTCCTCATCATTGATGATGGTTGGCAACAGATTGAAAGTAAACCAAAAAATGGTGATGATTGTTTTGTACAAGAAGGATCACAGTTTGCTACTAGGTTGACTGGTATTAAAGAAAATACTAAATTTCAGAAGAATAGACAGAGCAATGACACAATTTCTGGTCTGAAGCATGTCGTAGATGAAGCAAAGCGATGTCACAATATGAAATATGTTTATGTTTGGCATGCTCTAGCTGGTTATTGGGGAGGAGTGAAGCCTGCAGCAAGTGGCATGGAACATTATGACACTTCCTTGGCATATCCAGTACAGTCTCCAGGTGTGCTAGGAAACCAACCAGACATTGTCATGGACAGCTTGTCTGTGCATGGCTTGGGACTGGTGCACCCGAAGAAGGTTTTTGATTTCTACAACGAGCTTCATGCTTACTTAGCTTCATGTGGAGTGGATGGAGTGAAGGTTGATGTGCAAAACATTATTGAAACCCTAGGTAGTGGACACGGTGGCAGGGTCACGCTCACTCGCAGCTATCTTCAGGCACTTGAGGCCTCAGTTGCTAAGAATTTTCCTGACAATGGATGCATTGCCTGTATGTGTCATAACACTGATGGCCTTTATAGTTCCAAGCAGACTGCTGTTGTGAGAGCATCTGACGACTTTTATCCCTGTGATCCTGCTTCCCACACAATTCACATTTCATCTGTTGCTTATAACACACTTTTTCTGGGAGAGTTCATGCAACCTGACTGGGATATGTTTCATAGTTTACATCCAGCGGCAGAGTACCATGCTGCGGCTCGTGCAATTAGTGGAGGTCCAATTTATGTTAGTGATAAGCCAGGAAGACATAATTTTAATCTTCTCAAGAAACTGGTTCTGTATGATGGTTCAGTTCTCCGTGCTCAGTTGCCTGGCCGGCCTACTGTGAACACTCTCTTTGTTGATCCAGCAAGAGACGGGACCAGCTTGCTCAAGATATGGAACTTGAACAAATGCTCTGGCGTGGTTGGTGTGTTTAATTGCCAAGGTGCTGGGTGGTGCAAGATACAAAAGAAAACCCGAATTCATTGTCCATCACCTGGGACACTCACGGGCTCTGTTTGTGCCTCTGATGTTGACCTCATTGCTCAAGTAGCAGGTGCTGATTGGCATGGTGACACTGTTGTTTATGCCTACAGAGCAGGTGATGTAATTCGGCTGCCAAAAGGTGCTTCTGTTCCTGTGACACTGAAAGTTCTAGAGTATGAACTTTTCCATTTTTGTCCAATCAAGGAAATTGAGCCAAGTATTTCATTTGCACCGATAGGGTTATTGGATATGTTAAACGTTGGAGGTGCTGTGGAACATTTTGAGGTCCATAAAGAATCCAAAGTCCCGGATGGAGATAAATCAGGAAAAGCAACTATTATTCTCAAAGTCAGGGGAACTGGCAGATTTGGGGTTTACACCTCCCAGTGTCCTCTAAAGTGTGTGGTAGGTGGCAATGAAACAGATTTCAACTATGACTCAGAGACTGGGTTGACAACCTTGTACATCTCTGTGCCTGACAAGGACATGTACGTATGGCAGATAGAGATCCTTTTTGAGTCTTAA 2328 0.4442 MYILKHVESSIKCSNMTVTPMISINDGNLVVHGKIILSGVPDNIVLTPGTGKGLVTGAFIGATASNSKSLHVFPLGVLEDLRFLSCFRFKLWWMTHRVGTCGRDVPLETQFMLIESKDSKDYQENSLTVYTVLLPLLEGQFRAVLQGNDKNEIEISLESGDPAVQTKHGLHLVYMHAGTNPFEVINQAVKAVEKHMQTFSHREKKKLPSFFDWFGWCTWDAFYTDVTAEGVEEGLKSLSGGGTCPRFLIIDDGWQQIESKPKNGDDCFVQEGSQFATRLTGIKENTKFQKNRQSNDTISGLKHVVDEAKRCHNMKYVYVWHALAGYWGGVKPAASGMEHYDTSLAYPVQSPGVLGNQPDIVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVTLTRSYLQALEASVAKNFPDNGCIACMCHNTDGLYSSKQTAVVRASDDFYPCDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGRHNFNLLKKLVLYDGSVLRAQLPGRPTVNTLFVDPARDGTSLLKIWNLNKCSGVVGVFNCQGAGWCKIQKKTRIHCPSPGTLTGSVCASDVDLIAQVAGADWHGDTVVYAYRAGDVIRLPKGASVPVTLKVLEYELFHFCPIKEIEPSISFAPIGLLDMLNVGGAVEHFEVHKESKVPDGDKSGKATIILKVRGTGRFGVYTSQCPLKCVVGGNETDFNYDSETGLTTLYISVPDKDMYVWQIEILFES 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00285 775 Gene3D Aldolase class I 213 535 IPR013785 -
Phco6g00285 775 Pfam Raffinose synthase or seed imbibition protein Sip1 22 755 IPR008811 -
Phco6g00285 775 SUPERFAMILY (Trans)glycosidases 210 536 IPR017853 -
Phco6g00285 775 PANTHER - 16 771 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00285 Phco-Chr6 2800789 2805321 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00285 6 2800789 2805321 Phco6g00285 6 2800789 2805321 ECH
Phco2g01553 2 45714375 45718901 Phco6g00285 6 2800789 2805321 PCT