Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00279 ATGATGTGGGGATTGGATTCTGACAAGGATTTAACTATGGGAGAAGCACCTATTATCATTGGTCAAGACCTGCAGCATGGAAATGACAATGACTTTGAATCAAAAAGCGGGACTTTCGAAACGGGCACTATCATTGGTGATAAAAAGTATGTCATTGGTGAAACCGCTGCTGAATTTTTTTATGTGAAAGTTCAAATTCTTGACAACAACTGTCCTGGGGAATGGGTTAATGTTGTTGAGCTAGGCACTAAACCCATTTCATGTAATGGCCACTCAGCCGTGGTTTTGAAAGACAGAATACTAATTCTTAGGAAAGATTCTAACCCAGATGACTGTATATGGTTTCTGGAGGTGGACACTATGTTTGTCAGGGAGCAGCAGGAAAAAAATTTGGGGACTGAGGTTGTAGCATGGAGTAAGGGTGTGATAGGAAATGCTGAGAAACCTGTTGTTATCAGTGGTCCTTCTGGAGTGGGTAAAGGAACACTGATATCTAAGCTCATGAAGGACTTCCCCTCTATGTTTGGCTTCTCAGTGAGCCACACAACCCGTGCCCCAAGAGCTATGGAGAAGGATGGGGTCCATTACCATTTTACGGAGAAGAATGTTATGGAGAAAGAGATAAAGGATGGAAAGTTTCTGGAGTTTGCTTCTGTCCATGAAAATCTATACGGGACCAGTGTTGAGGGTGTGGAGCTGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCCGTGAGGGCTAGTACTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGACGACCTGGAGAAGCGTCTTCGTGACCGAGGGACAGAGACGGAAGAACAGGTCCTAAAGCGACTAAGAAATGCTCAGGCTGAGATTGAGCAAGGGACGTCATCGGGCATATTTGATCACATCTTATACAATGACAATCTTGAGGAGTGTTATGAGAATCTGAAGAAATTATTGGGACTTGATGGATATGATGTTCCTCCCAAGTCTGCACCAAAAGCGATAGATCTCCCAAGGGATCATTCAGTGTCAAAAATTGACGACAAAATCATCATAAATTCCACCTCTTCTTCAATACTAGAAAAGGAATCAAAGAACTTGATCATGCTAGACGTGTCATCTCTTAAAGGGGGTGCACCTGGAAGGACAAGAGGACTTAATTTTGAAGCCATTGACTCGTTTTCAGAAGGCTTCAATGGCAGTGGAAATTAA 1239 0.4302 MMWGLDSDKDLTMGEAPIIIGQDLQHGNDNDFESKSGTFETGTIIGDKKYVIGETAAEFFYVKVQILDNNCPGEWVNVVELGTKPISCNGHSAVVLKDRILILRKDSNPDDCIWFLEVDTMFVREQQEKNLGTEVVAWSKGVIGNAEKPVVISGPSGVGKGTLISKLMKDFPSMFGFSVSHTTRAPRAMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHENLYGTSVEGVELVSDAGKRCILDIDVQGARSVRASTLEAMFIFICPPSMDDLEKRLRDRGTETEEQVLKRLRNAQAEIEQGTSSGIFDHILYNDNLEECYENLKKLLGLDGYDVPPKSAPKAIDLPRDHSVSKIDDKIIINSTSSSILEKESKNLIMLDVSSLKGGAPGRTRGLNFEAIDSFSEGFNGSGN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00279 412 CDD GMPK 149 325 - -
Phco6g00279 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 328 IPR027417 -
Phco6g00279 412 NCBIfam guanylate kinase 148 328 IPR017665 GO:0004385|GO:0006163
Phco6g00279 412 PANTHER GUANYLATE KINASE-RELATED 61 358 - -
Phco6g00279 412 Pfam Guanylate kinase 147 328 IPR008145 -
Phco6g00279 412 ProSiteProfiles Guanylate kinase-like domain profile. 147 329 IPR008144 -
Phco6g00279 412 SMART gk_7 146 332 IPR008145 -
Phco6g00279 412 FunFam Guanylate kinase 2 140 332 - -
Phco6g00279 412 ProSitePatterns Guanylate kinase-like signature. 182 199 IPR020590 -
Phco6g00279 412 Gene3D - 143 330 IPR027417 -
Phco6g00279 412 SUPERFAMILY Galactose oxidase, central domain 44 122 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00279 Phco-Chr6 2750489 2753424 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00279 6 2750489 2753424 Phco6g00279 6 2750489 2753424 ECH
Phco2g01556 2 45795958 45798816 Phco6g00279 6 2750489 2753424 PCT