Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01556 ATGAATCCTTCTCTCACATTTTCCTCCACCTTCATCTTCCGTCTCCTCTTCTTATTCTCTTGGTTGTGCTCCCTTTTTTCTTCTTCTGTGTTTTTTCCTTTTCCTCACTACAACAACTCTCTTGCGCTCAACACACCCTCTACAAGGTTGTTCATTACTTCCCCTGCAGCTCTTTATTTTTCCCGTTTTCCCAGGATTGTGGGCTCAGATTTATCTATGGGAAAAGCACCAGCATTGCTTGTTGATGACCTGCAGGATGGGGCTCAGAATGGCCTTGAATTGAAAAACGGATCTTGCGAAGCAACTGCTACCATTGGTGATAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAATCTTCGAGAATGGGTTCGTCCCACGGTGAGGGGCACCAAACCCGTGTCGTGCAAAGGCCTTTCGGCAGTACCTTTGGAAGACAAAATACTAATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTCGACACCCAATATGTTAGGCAGCAGCAAGAATCTCTGGGGACTGAGGTGGTTGCATGGAGTAAAGGTGTGGTAGGAAATGCTGAGAAGCCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACATTGATAGCAATGCTTATGAAGGACTTTCCCTCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCGAGAGCTATGGAGAAAGACGGGGTCCATTATCATTTTACTGAGAAGAGTATAATGGAGAAAGAAATCAAGGAGGGAAAGTTTCTTGAGTTTGCTTCTGTCCATGGCAATCTGTATGGAACTAGTGTTGACGCTGTGGAACTAGTGGCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTGTATGTCCCCCGTCAATGGAGGTGCTGGAGAAGCGCCTTCGTGACCGACGGACAGAGACTGAGGAACAGATCCTGAAGCGACTAAGGAATGCTGCGGCAGAGATTGATCAAGGCAAATCTTCTCACATATTTGATTTCATCCTGTACAATGACAAACTTGTTGAGTCTTGCGACAGACTTAAGAAACTATTGGGACTTGATTTTGTCACTACTCCTAAATCGGGCCCTGGAGAGATTGATCTACCAATTGACCATTCAGTGTCAAAAATTGATAACAAAATCATCATAAACCGCATCTCCTCAGGAGAGAAGGAATCAAAGAATTTGATCATATTAGATGTTTCCTCACTAAAAGGAGGTGCACCTGGACGGACCAGAGGCCTTAATTTCCAAGCCATTGGCTCATTCTCAAATGGCTTGACTGAGAGAGAGGGACTTAGCTAA 1410 0.4433 MNPSLTFSSTFIFRLLFLFSWLCSLFSSSVFFPFPHYNNSLALNTPSTRLFITSPAALYFSRFPRIVGSDLSMGKAPALLVDDLQDGAQNGLELKNGSCEATATIGDKTYVIGGADDGTLSIEVQIFDRNLREWVRPTVRGTKPVSCKGLSAVPLEDKILILKKGSKPDDQIWFLEVDTQYVRQQQESLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLIAMLMKDFPSMFGFSVSHTTRAPRAMEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVDAVELVADAGKRCILDIDVQGARSVRASSLEAIFIFVCPPSMEVLEKRLRDRRTETEEQILKRLRNAAAEIDQGKSSHIFDFILYNDKLVESCDRLKKLLGLDFVTTPKSGPGEIDLPIDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKGGAPGRTRGLNFQAIGSFSNGLTEREGLS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01556 469 ProSiteProfiles Guanylate kinase-like domain profile. 205 387 IPR008144 -
Phco2g01556 469 SUPERFAMILY Galactose oxidase, central domain 96 185 IPR011043 -
Phco2g01556 469 FunFam Guanylate kinase 2 198 390 - -
Phco2g01556 469 Gene3D - 212 381 IPR027417 -
Phco2g01556 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 386 IPR027417 -
Phco2g01556 469 Pfam Guanylate kinase 205 386 IPR008145 -
Phco2g01556 469 Gene3D - 94 211 IPR015915 GO:0005515
Phco2g01556 469 PANTHER GUANYLATE KINASE-RELATED 103 403 - -
Phco2g01556 469 SMART gk_7 204 390 IPR008145 -
Phco2g01556 469 FunFam Guanylate kinase 1 237 296 - -
Phco2g01556 469 CDD GMPK 207 326 - -
Phco2g01556 469 ProSitePatterns Guanylate kinase-like signature. 240 257 IPR020590 -
Phco2g01556 469 Gene3D Guanylate Kinase phosphate binding domain 237 296 - -
Phco2g01556 469 NCBIfam guanylate kinase 206 386 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01556 Phco-Chr2 45795958 45798816 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01556 2 45795958 45798816 Phco2g01556 2 45795958 45798816 ECH
Phco2g01556 2 45795958 45798816 Phco6g00279 6 2750489 2753424 PCT