Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00168 ATGGTGAATGACTTGACCAGAAGTGTTGATTTTGAGAAATTCTCATGGAAAATTGAGGATTTCTCTAAACAAAATGTCATGAAATTGCGCTCCAAGCCTTTCAAAATCCGAGGCTGTACATGGAGGATCCTTGTGCATCCACTGAGGAGGGATGTGGACCATTTTTCAGTGTATTTGATGGTTGCTGATTCTTTACCTCCGTATGGATGGGACAGAAACACGTTTTTCAAGTTGGTTCTAATTAATCAACTGGACGACAATAAGTCCATTGAAAAAGTGACTAAACAAAAGTTCAATGGAGGACATCGTAGCTGGGGTTCATTTTTCTTGGATCTAAGTGATTTCTACAACCAAGGATATCTTGTGAGGAACACGTGCATCATTGAGGCACACATTTGTGTCTCGGATTTAGCGCCTAATATTCAAGTTCACCCAAATTGTTCTCCATCTCATGAGTCTTTAGCAGGTGGTCAAGCAACAAAATCATCCTCAGAAAGGGACAGCATTAGTCCAAGAACCTCAGGATCTAGTGCAGCAGAAGGGGAAATTCAAGATGCAAATAGTTTGACACTAAGAGAACTGATAGATTTGGAGAGTTTAGGAGCAGAAGAAGAAGCTTTCATTCCACTGCTGGAAGAGGTTTGCATATGGCATCCTAATCTTATACAGTGCCAGAAGGAGAGAACTCGGAGGTTTAGACAATGGGCCTTCACATCATTGGGTCAAGTTTTGCATTTTCTCAAGACCAAAAGGGTGAAGGATATGAGTGAAGAGGACATAAAGCATCTGTATGATTTGTGGAAGGAACTTGTGAGGTCCTCAGGATTTGACTTGGCATGGCTGGAGCCATATGTTCAATCAGCATTGGGTTTGAAAGATTACATGGAAAGAGCAAAGCAATTGAAGAAAGTTAAGGACACTGTGGTTGCTTTGGAGATCAAGATGAAGAGGCTGAGGGGGGAACTTGCTGCTTCTGAAAGAGAGTTTGAGATTGCAAGAAGAAGGTTATCAGAAGTAAGAAGAAGTTTCAACGAGATGGATATGAATTCTGCAATTGGATATGCTATGTTTTAG 1074 0.4106 MVNDLTRSVDFEKFSWKIEDFSKQNVMKLRSKPFKIRGCTWRILVHPLRRDVDHFSVYLMVADSLPPYGWDRNTFFKLVLINQLDDNKSIEKVTKQKFNGGHRSWGSFFLDLSDFYNQGYLVRNTCIIEAHICVSDLAPNIQVHPNCSPSHESLAGGQATKSSSERDSISPRTSGSSAAEGEIQDANSLTLRELIDLESLGAEEEAFIPLLEEVCIWHPNLIQCQKERTRRFRQWAFTSLGQVLHFLKTKRVKDMSEEDIKHLYDLWKELVRSSGFDLAWLEPYVQSALGLKDYMERAKQLKKVKDTVVALEIKMKRLRGELAASEREFEIARRRLSEVRRSFNEMDMNSAIGYAMF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00168 357 Pfam MATH domain 19 132 IPR002083 GO:0005515
Phco6g00168 357 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 144 IPR008974 GO:0005515
Phco6g00168 357 MobiDBLite consensus disorder prediction 149 182 - -
Phco6g00168 357 ProSiteProfiles MATH/TRAF domain profile. 11 132 IPR002083 GO:0005515
Phco6g00168 357 SUPERFAMILY TRAF domain-like 13 136 - -
Phco6g00168 357 CDD MATH 13 132 IPR002083 GO:0005515
Phco6g00168 357 Coils Coil 301 342 - -
Phco6g00168 357 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00168 Phco-Chr6 1641413 1642845 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00168 6 1641413 1642845 Phco2g02294 2 53515996 53519800 PCT