Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00167 ATGGAGAAGGAGAACAACAAGGATAAGATGTTTGAGAAATTTACATGGACGATCAAGGACTTCTCTAAATTGGACTCTCATAAACTATACTCTGAGAAATTTTCCATTGATGACCATTTATGGAGGATTCTCATTTTTCCAAAGGGATTAAAGAATGCGAATTACTTGTCAATTTATTTAGAAGGCGTTGAAAATTTGGTTGAGGGATGGAACAAATTTATAAATTTTAAGTTGGCTTTAATTGATCAGATCAACCACAAAATGACTAAAACAGGAGAAACTGAACACCAATTCAATGCCAAAAGTAATGATTGGGGTTTCGCACGATTCATACCTTTAGATGAACTTCATAACCCTAACAATGGATTCATAGTGAATGATACTTGCATAATTGAAGTTGAGATTTTGGTGAGTAAGTTAAAACACGAGAATGAAGTAGATAAAACAGACAACCAGATTAAGGATATACTTACCAAACATACTGATAAACCTTTACCTAAGAAAACATTCACAACAGTTGATGAGGTAGTGGATTTGAAGGGTTTAGGCAAAATAGAACAAGATTTTTATCCACTATTAGAAGAAGTATGTTCACGACATCCTTCACTTCTTAATAGTCAAAAGAAGAGAACCCTTGAGTATGTTGAATGGGCATTCACAGCTTTAGGTAGAGTTCTGCATTTTCTTAAGACTAAAATGGTGAAAGATATGGATGAAGATACATGTAATCATCTCCAAATTTTATGGGAGGAACTTGAGACATTCAAATTTGATTTGACTTGGTTGGAACCCCATGTTCAATCAGCCCTAAGCATGAAAACTTACATGGAGAGAAGTGTTCAGGTGAAAAAATTGAAGGAAAATGTGTCTTCTTTGGAGATGGAAACAAAGATGCTTAAGGAAAAAATTATAGAAACAAAGGTAAATCTTGAAATAACGAGAAGAGAATTGACAAAAATAAGTGAAGGCTTTGTAGAATATAATTTGGATGATGGGTTAGCATATGGAGGCTAA 1014 0.3373 MEKENNKDKMFEKFTWTIKDFSKLDSHKLYSEKFSIDDHLWRILIFPKGLKNANYLSIYLEGVENLVEGWNKFINFKLALIDQINHKMTKTGETEHQFNAKSNDWGFARFIPLDELHNPNNGFIVNDTCIIEVEILVSKLKHENEVDKTDNQIKDILTKHTDKPLPKKTFTTVDEVVDLKGLGKIEQDFYPLLEEVCSRHPSLLNSQKKRTLEYVEWAFTALGRVLHFLKTKMVKDMDEDTCNHLQILWEELETFKFDLTWLEPHVQSALSMKTYMERSVQVKKLKENVSSLEMETKMLKEKIIETKVNLEITRRELTKISEGFVEYNLDDGLAYGG 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00167 337 ProSiteProfiles MATH/TRAF domain profile. 11 135 IPR002083 GO:0005515
Phco6g00167 337 Coils Coil 282 302 - -
Phco6g00167 337 CDD MATH 13 135 IPR002083 GO:0005515
Phco6g00167 337 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 151 IPR008974 GO:0005515
Phco6g00167 337 SUPERFAMILY TRAF domain-like 13 139 - -
Phco6g00167 337 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 311 - -
Phco6g00167 337 Pfam MATH domain 18 136 IPR002083 GO:0005515
Phco6g00167 337 SMART math_3 13 116 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00167 Phco-Chr6 1630499 1632280 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00167 6 1630499 1632280 Phco6g00499 6 4788100 4819832 ECH
Phco6g00167 6 1630499 1632280 Phco6g00167 6 1630499 1632280 ECH
Phco6g00167 6 1630499 1632280 Phco3g00893 3 7522975 7534480 ECH