Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00162 ATGGCTTCGGAAGTAGTCCCATCTTCCAGGGATTTGTTGAAATGTTGCAATTGTGGATGTGGTTGCTCCATGTTAGCTCAATCTTCGGGAACTTGGATTCGATCTGTTAAACGAAAGCATGATGAGTTCAAAATGGATGGCCAACTGGCCATGCCCGTGTTTGCAAGGGTCGAAATTGAGAATGAATGTGTGGCCTTGCGTGAGATGGTCAGTATGCAGCAGAAAACCATTCAAGATTTGAATGCTGAGTTGGAGGAAGAGAGAAATTCTTCATCAACTGCGGCGAATGAGGCCATGTCAATGATATTGAGGCTTCAGAGGGAAAAGGCAGAAGTTCAAATGGAGGCACGCCAATTTAAACGTTTTGCGGAGGAGAAGATGACACATGATCAGGAGGAACTTCTATCTTTGGAAGATTTGTTGTATAAGAGGGAACAGATCATTCAGTCACTTACTTGTGAAGTTCAGGCTTACAAACACAGGTTGATGAGTTTTGGTCTCAGTGAGGATGAGGCTGAGGGTAATCAATATGAACTTCCAACCTATGAATATCCTCCTTTGAAATGTAGTGTGATGCATGGTGCTACGGATGCTGATAATGATGACACAGATATAGAGAAATATGCTTTTGGTGAGACTCCTACTGACCGTCTGAGGAACTTAGAAAATAGGATTTCTCAAATGGAGAAAACTCCCACTTATAGCCAGATGGATGGGGATTTTACAGGGAAAAATATTCTAGAGAAAGTAATTGTTGGACAGTCTCCGAGAAGGAATAAGCATTCTAGGAGACTTTCCAGTGACTCAACATCATTTGGTGGGATGGTTAAAGAAACAGGACCCGAGTCTATGATGGATTCTCCCAAGCGCAATAGTAATTATAAGAAAGATTATTTCTCGAAGACAGAGGATCCTTCCAAGGCAGATAATGTATCAGAAGGTGACGATATGAGTGACAGAATTTATACAATTGACTCTGTTCATTGTGGGGCACCTTATAATGGTTTCACAGATTCTAAAGCCGGAGCTGTTGATTTCGAAGATTATGCAACCACCCCAAGAGAGTCAGGGAATCATGCAACTGAATTTGAGGATCCCTATGTAAAGAAGCTTTACATGAGGCTTCAGGTACTTGAGGCTGATAGGGAATCAATGAGGCAGGCACTCATTTCAATGCGCACGGATAAAGCACAACTGGTGTTGCTGAAGGAAATAGCTCAACATCTGTGCAAAGAGATGTCACCGCAAAGAAAAATGGCAAAAAAACCGAGTTTTGCTGGCAACTCTGCACTATTTTCAATTGTTAAGTGGGTTTCTTCAATTGTTTTCTGGAGAAAGAGAGCTCGTCAAAGCAAGTTTATGTTTGGTCTACCTGCTGAAAGTGTTGGCTTGCTGATGCTCCTGGACAAGGGAACACGAGCAAGACCATGGAGATGCGTTTCAAGTACACAAGTGGGGGATTAA 1464 0.4242 MASEVVPSSRDLLKCCNCGCGCSMLAQSSGTWIRSVKRKHDEFKMDGQLAMPVFARVEIENECVALREMVSMQQKTIQDLNAELEEERNSSSTAANEAMSMILRLQREKAEVQMEARQFKRFAEEKMTHDQEELLSLEDLLYKREQIIQSLTCEVQAYKHRLMSFGLSEDEAEGNQYELPTYEYPPLKCSVMHGATDADNDDTDIEKYAFGETPTDRLRNLENRISQMEKTPTYSQMDGDFTGKNILEKVIVGQSPRRNKHSRRLSSDSTSFGGMVKETGPESMMDSPKRNSNYKKDYFSKTEDPSKADNVSEGDDMSDRIYTIDSVHCGAPYNGFTDSKAGAVDFEDYATTPRESGNHATEFEDPYVKKLYMRLQVLEADRESMRQALISMRTDKAQLVLLKEIAQHLCKEMSPQRKMAKKPSFAGNSALFSIVKWVSSIVFWRKRARQSKFMFGLPAESVGLLMLLDKGTRARPWRCVSSTQVGD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00162 487 Coils Coil 70 115 - -
Phco6g00162 487 ProSiteProfiles GTD-binding domain profile. 61 159 IPR007656 -
Phco6g00162 487 MobiDBLite consensus disorder prediction 251 314 - -
Phco6g00162 487 Pfam Zein-binding 65 155 IPR007656 -
Phco6g00162 487 Coils Coil 368 388 - -
Phco6g00162 487 MobiDBLite consensus disorder prediction 289 314 - -
Phco6g00162 487 PANTHER BNAANNG28530D PROTEIN 58 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00162 Phco-Chr6 1580489 1582900 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00162 6 1580489 1582900 Phco6g00162 6 1580489 1582900 ECH
Phco2g02284 2 53439330 53441570 Phco6g00162 6 1580489 1582900 PCT