Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02284 ATGGATTTGGAATCTTCCGGGGATTCGGTGAAATGTTGCAAGCACTGCGAATGTGGGTGTATTGATTGCTCCATGGCAGCTCGATCTTCAGGAAATTGGCCCCGTTCTGTGAAAAGAAAACACAAGGAGTTGGAACGGGGCGGGCAATTCTCTGTGGCAGGGCTGGATTGCGATCCGGTGGCGCGTGTCGAGATTGGAAATGAATGTGAAGCCTTACGGCAGGCTGTTAGCAGCCAACAACAATCAATACAGGATTTGTATGCTGAATTGGAGGAGGAGAGGAGTGCTGCCTCCTCGGCCGCGAATGAGACCATGTCAATGATATTGAGGTTGCAGAGGGAGAAGGCGGAGCTTCAGATGGAAGCGCGCCAGTTCAAGAGATTTGTTGAGGAGAGGACGGTTTACGATCAGCAGGAGGTTTTATTGTTGGAGGATATGTTGTATAAGAGGGAACAGGCAATTCACTCGCTTACCTGTGAGGTACAGGCTTATAAGCACAGGTTGTTGAGTTTTGGCCTCACTGAATCCGAGGCAGAAGGTGATCAGGATGAATTTCCCCCTTATGAGTACCCTCCTTTGAGATGTAAGGCAATGCATGCTTGTGCTGATACGGACATTGATGACATAGACATTGATAAATATGCTTTTGGAGAAACTCCTAAGGACCGATTGAGGAACTTAGAAAGTAGGATATCTCAAATGGAGAGAAGCCCCACTTATAGCCAGGTAGATGGGGAATTCAGTGGAAAAAATATTCTAGAGAAGGTGATAGTTGGACAGTCTCCAAGATGGACTAAACATTCCAGGAAATTTTCTTGTGACTCATCTTCACTGTGTCCTGAGTATATGATGGATTCTCCCAGCTTTAGGAAGATGGATTGTCTCTCACAATCGGGGGACCTTCCCAACCTGAAGAAGATGGATAATGTATCAGAAGCTGGTGATGATATTATTGATAAAGTCTATACAATTGACTCAGAGTTCAAAACTGGAGTTAGTGTTTGCGATGATTATGCAGGCACTCCAAGGGACTTTGTTAATAATGCGGATTTTGAAGATCCATACGTAAAGAAGCTTTACATGAGGCTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTGTTTTACTGAGAGAAATCGCTCAAGAATTGTGCAAGGAGATGTCAGAGCAAAAAAGAATGACAGCGAGGTCTTTTATTAGCAGCTTCTCATTCTTGACAGTTTTCAAGTGGATTGCATCAATTGTTTTCTGGAGAAAGGATGCTCATAAAATCAAGTACATGTTCGGGCTACCGTCTGACAGCGTGGGCTTGCTAATGCTGCTTGACAAAGGACCCCATGTAAGGTCATGGAGATATCTTCAAAGTACACAAATGGGAGAGTAG 1425 0.4463 MDLESSGDSVKCCKHCECGCIDCSMAARSSGNWPRSVKRKHKELERGGQFSVAGLDCDPVARVEIGNECEALRQAVSSQQQSIQDLYAELEEERSAASSAANETMSMILRLQREKAELQMEARQFKRFVEERTVYDQQEVLLLEDMLYKREQAIHSLTCEVQAYKHRLLSFGLTESEAEGDQDEFPPYEYPPLRCKAMHACADTDIDDIDIDKYAFGETPKDRLRNLESRISQMERSPTYSQVDGEFSGKNILEKVIVGQSPRWTKHSRKFSCDSSSLCPEYMMDSPSFRKMDCLSQSGDLPNLKKMDNVSEAGDDIIDKVYTIDSEFKTGVSVCDDYAGTPRDFVNNADFEDPYVKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLREIAQELCKEMSEQKRMTARSFISSFSFLTVFKWIASIVFWRKDAHKIKYMFGLPSDSVGLLMLLDKGPHVRSWRYLQSTQMGE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02284 474 Coils Coil 356 383 - -
Phco2g02284 474 PANTHER BNAANNG28530D PROTEIN 66 407 - -
Phco2g02284 474 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Phco2g02284 474 Pfam Zein-binding 71 161 IPR007656 -
Phco2g02284 474 Coils Coil 69 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02284 Phco-Chr2 53439330 53441570 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02284 2 53439330 53441570 Phco2g02284 2 53439330 53441570 ECH
Phco2g02284 2 53439330 53441570 Phco6g00162 6 1580489 1582900 PCT