Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00092 ATGACGCTTGGCTCAGGAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAACGAGGAGAAAAAGGTATTGGAGACGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGATCTTGGACTGGCACCATTATTGGCCCCCACAATACTGTACATGAAGGAAGAATCTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAACATGACTTGTGTTAATCATGAAAATGGAGTGGTTGAACCAAAGAAGTTTGGTCCTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGATATACTGACCCAGCTGAAGAAGGAGATGGCAGCTCCTCATAACCGGAAGCTTGTCCAGCCCCCAGAAGGAACCTACTTTTAG 441 0.4603 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHENGVVEPKKFGPLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00092 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 46 134 - -
Phco6g00092 146 SMART ubc_7 16 144 - -
Phco6g00092 146 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 4 146 - -
Phco6g00092 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
Phco6g00092 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Phco6g00092 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Phco6g00092 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00092 Phco-Chr6 912648 915104 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00092 6 912648 915104 Phco6g00092 6 912648 915104 ECH
Phco2g02224 2 52920683 52926574 Phco6g00092 6 912648 915104 PCT