Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02224 ATGGGAGGAGAAGCGTGGACTGAGAATACGTGTGGTGTAATTGAGACATTTCGATACTTTGATCAGATCCACAACAATTGTTCATCCATGACGCTTGGCTCTGCAGGATCCAGTGTCGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAACTTGAAAAGGGAGAAAAGGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGATATTTACATGCGCTCTTGGACTGGCACTATTATTGGCCCCTATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGTTGTTTTGTGATAAAGATTACCCAGAAAAGCCTCCAAGTGTTCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAATTTGGTCTTCTTGCAAATTGGCAACGAAAGTTTACCATGGAAGATATATTGACCCAACTGAAGAAGGAAATGGCAGCTTCACATAACCGCAAGCTTATCCAGCCTCCTGAAGGTACTTGCTATTAG 528 0.4148 MGGEAWTENTCGVIETFRYFDQIHNNCSSMTLGSAGSSVVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQRKFTMEDILTQLKKEMAASHNRKLIQPPEGTCY 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02224 175 SMART ubc_7 45 173 - -
Phco2g02224 175 Pfam Ubiquitin-conjugating enzyme 72 161 IPR000608 -
Phco2g02224 175 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 33 175 - -
Phco2g02224 175 SUPERFAMILY UBC-like 40 175 IPR016135 -
Phco2g02224 175 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 42 175 IPR000608 -
Phco2g02224 175 Gene3D Ubiquitin Conjugating Enzyme 28 175 IPR016135 -
Phco2g02224 175 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 75 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02224 Phco-Chr2 52920683 52926574 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02224 2 52920683 52926574 Phco2g02224 2 52920683 52926574 ECH
Phco2g02224 2 52920683 52926574 Phco6g00092 6 912648 915104 PCT