Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01428 ATGGCTGCCTCATCCACCATCAACAACTTCCTCTCTTTCTTCTTACCCACAAAACCTCCGCCACCCTCTACACCGCCGCCACTCCAATTCAACCCCACCACTTCTTCTCCCACCAACAAACCCTCACAACCCCTAATTGCGCAATATGACCCTTCTTCTTCTTCATCTGAATTGTCCTCTGTGATATGCCCCTCCATGGCCTACTCCAACACGCTCTTCTTCCAGTCACCTTACAACGTGCAGGTGGTGGTGGCCGAGGACGAGCCCGAGGAGCGCCTCCTCAACAGGTTCCGCAGAGAGGTGTTGAAGGCCGGCGTCATTCAGGAGTGTAGGCGGAGGAGGTACTTCGAGAACAAACAGGAAGAGAAAAAACGCAAGTCGCGTGAAGCTGCCAAACGTAACCGCAAAAGACGCCCCATGTCAAAAACTGTAGCACAGAAAAAACAGGATGTCCCAGCAACCAAGAGAGAAGAAGACAAGGATAACTGGGATCTACCTGAAGGAGACAGTCTGTATTAA 519 0.5164 MAASSTINNFLSFFLPTKPPPPSTPPPLQFNPTTSSPTNKPSQPLIAQYDPSSSSSELSSVICPSMAYSNTLFFQSPYNVQVVVAEDEPEERLLNRFRREVLKAGVIQECRRRRYFENKQEEKKRKSREAAKRNRKRRPMSKTVAQKKQDVPATKREEDKDNWDLPEGDSLY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01428 172 MobiDBLite consensus disorder prediction 149 166 - -
Phco5g01428 172 Gene3D Ribosomal protein S8 94 132 IPR038380 -
Phco5g01428 172 MobiDBLite consensus disorder prediction 33 52 - -
Phco5g01428 172 PRINTS Ribosomal protein S21 family signature 83 91 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 PRINTS Ribosomal protein S21 family signature 91 100 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 PRINTS Ribosomal protein S21 family signature 115 125 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 PRINTS Ribosomal protein S21 family signature 103 113 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 Hamap 30S ribosomal protein S21 [rpsU]. 79 135 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 MobiDBLite consensus disorder prediction 15 32 - -
Phco5g01428 172 MobiDBLite consensus disorder prediction 118 172 - -
Phco5g01428 172 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 172 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 Pfam Ribosomal protein S21 81 135 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco5g01428 172 MobiDBLite consensus disorder prediction 13 52 - -
Phco5g01428 172 NCBIfam 30S ribosomal protein S21 80 137 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01428 Phco-Chr5 49715832 49717961 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01062 2 16415380 16417950 Phco5g01428 5 49715832 49717961 PCT