Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01062 ATGGCAGCCTCATCCTCCTTCTCCTCCTTCCTCTCCTTTCTCCTCCCTCCCAAGCTGCCACAACTGCACCCTCCTCCCGTCACGCGGTTTTCGCTTCAAAGCCACAAGCTCTATGCTCAACACCGAGATCACCACTCACCGGAGCTGCCCTCCCACGTGATAATGAACCCTTCTCACGCGCAGGCAAACACGCTCTTCTTCCGGTCTGCGTACAACGTGCAGGTGGTGGTTGACGAGAACGAGCCCGAGGAGAGGCTGCTCAACCGCTTCCGGAGAGAGGTCATGAAAGCCGGAGTCATACAAGAATGCAAGAGGAGACGCTTCTTTGAGAACAAGCAGGAGGAGAAGAAACGGAAGAACCGCGAAGCTGCTAAGCGTAAAAGCAGAAGCAGGCGCCCTCAATCAAGATATCAAGCACAAAACAAGCCGGATGTTGCAACAGCCAAGAAGGTGGAGGATGATGATAACTGGGATCTTCCAGAAGTAGACGCCCCATATATTTCAACCACATGA 513 0.5361 MAASSSFSSFLSFLLPPKLPQLHPPPVTRFSLQSHKLYAQHRDHHSPELPSHVIMNPSHAQANTLFFRSAYNVQVVVDENEPEERLLNRFRREVMKAGVIQECKRRRFFENKQEEKKRKNREAAKRKSRSRRPQSRYQAQNKPDVATAKKVEDDDNWDLPEVDAPYISTT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01062 170 NCBIfam 30S ribosomal protein S21 73 129 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 PRINTS Ribosomal protein S21 family signature 84 93 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 PRINTS Ribosomal protein S21 family signature 108 118 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 PRINTS Ribosomal protein S21 family signature 96 106 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 PRINTS Ribosomal protein S21 family signature 76 84 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 MobiDBLite consensus disorder prediction 112 170 - -
Phco2g01062 170 Pfam Ribosomal protein S21 74 127 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 Gene3D Ribosomal protein S8 87 125 IPR038380 -
Phco2g01062 170 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 166 IPR001911 GO:0003735|GO:0005840|GO:0006412
Phco2g01062 170 Hamap 30S ribosomal protein S21 [rpsU]. 72 128 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01062 Phco-Chr2 16415380 16417950 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01062 2 16415380 16417950 Phco5g01428 5 49715832 49717961 PCT