Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01420 ATGGTTCTAGGCATGAGAGGAAAGAACAGGAGAGGTTTCACAGTTCAAGTTGATTTCCTCATTCACATTCAGGAGATTAAGCCTTGGCCCCCATCACAATCTCTAAGATCCCTGCGATCCGTGTTGATAGAATGGAAGAATGGTGAATGTGCATCAGGTTCTACTACTCTTGCTGCTCCTTCTCTTGGTTCAGTTATAGGTGAAGGAAGAATCGAATTTAATGAGTCATTTAGGCTACATGTAACTTTGTTGAGGGATATGTCTGTAAGAAGTGGTGATACTGATGTGTTCCAAAAGAATTGCTTGGAATTCAACTTGTATGAGCCACGAAGAGATAGGACTATTAAGGGTCAGTTGTTGGGAACTGCAATCATAGACTTGGCAGAATATGGGACACTTAAAGAGTCCTTGATCACTAGTGTTCCTATGAACTGCAAGAGGAGTTACAGGAACACAGAACAGCCACTTCTGTTCCTTAAAATTCAGCCTCTTGAGAGGAATCGTGCTAGTTCCTCATCCAAGGAAAATAATGGTGGTGAATCAGTATCAGCACTCATGAATGAAGAGTATGCTGAAGAAGCTGAAATTACCTCTTTTACTGATGATGATGTCTCCTCACATTCGTCTGCAGCTGCAGCTTCTCCTTCCCTTGACTCCAGAGGGTTTACCTTGCTGAAATTAGTAAAGAATGAACCAACTAGGAACACTAATGTGAATGCCAAGGAACATCCCTTTGCCTCAGAAACAAGGCTTGGAAACATGAATATGATGCAACAAGATACACACCAGAAGCTTGAGAGGAGTTCTTACATGTCATCATTGGATGTATCTTCTATTACGAGGAGTGTACTAAATGGTCATGCTTCTAACTCTCCCATTCACAATTCATTGTCAGTTCAAAAGTTTGCCTCTTTACCAAGTGCTAGTTCTTCTTCACCATCTTCAACTTATGAGAATTTAGACATAAATCCTAGGAGCAACACAAGAAGCAGTGGCCATGAAACTTTGGATCAGAGTTTTCAAGAAAAGCTTGCTAACTACAGAAATATAGTTGCAGATGTCAAAAGAAACACAAACGGAAGTACTTTTGGCATTTATTCAAAACAAACATCATCTCAAGATAGAGCTCAATTCACTGGCAAAAATCCTGGCTTTGAAAACTGTGATGCAACTGAATATGATGAAAAATTAAATGGGAGATGTATAGAAGCTGACAAATATTCTATGAAGGAGAGTGGAGGTGATAAAGTTCGCCATGGTTCTGTTGAGGACATAAGTGGAAATGAAAATTATGATTTGGATAGGAAAAACTGCATGGAGGATGAAAAATTAGAAGCACAAGATGCCAAGGATCAAGCTTCAATGGATAGCAATACATATTCTTTTGGAGGGTCAAATATTGCTATGCAGGAAAATAATCTCAAAAGTGAAAGACTAAAGAACATCAAGTCTGTGAGGATACCAGCAGACACTGCCCGGAATACTGGATCACTTGGTAGCAATCATCAAGCTGAATTAAATGAAAATGGCATTCTTGGACATTCAAAAAACAGTGGAGGGAACAGAAACAATGAAAGAAGAGATTCTAAGATTCATACAAAGGAAGCAAGAAATGGTGCTTTAGATGGAAAAGTTGAGCAGTTGGAGAAGAAGATAAAGATGCTTGAAGGAGAGTTAAGGGAAGCAGCTGCAGTTGAGTCTGCTTTATATTCTGTAGTTTCTGAGCATGGAAACTCCACAAGTAAAGTTCATGCCCCATCACGGCGCCTTTCCAGGCTCTATCTTCATGCTTGTAAAGAAAATTTTCAAGGAAGAAGGGCTGGGGCAGCTAAAAGTTCTGTTTCAGGATTAGTACTTGTTACAAAGGCATGTGGAAATGATGTCCCAAGGTTGACCTTTTGGCTGTCTAATACTGTAGCGTTGAGAACAATTATAAGTCGAACCATCAAAGATCCGTCAGGATCTGGTAGGAGAAGGAAAGCTGAGGAGGAGGGGTATGGCAAGATAACACCCTCACAGAGGGTGAAGGGGTTATACCCCAGAAAAAATGAAAATACAGCATTAGGATATGGAGGTTTTGGTAACTGGGACGATCCCCAGGTACTCATATCAGCACTGGAAAAGGTGGAAGCATGGATCTTCTCTCGCATTATAGAATCTATCTGGTGGCAGATTTTGATTCCACATATGCAACACACAAAGTTCAACAGCAAAGAAGTGGTTTCAGACTCAAGAAAAAGCTACAGAAGGACTTCTAGCTCATGTGATCAAGAGCAGGGTAACTTGTCTCTATATATTTGGAAGAATGCTTTTAGGGAAGCCTGTGAAAGGATCTGTCCTATTCGAGCTGGAGGGCATGAGTGTGGCTGTTTGCCAATGCTTTCTAGATTGATAATGGAGCAATGTGTTGCGAGATTAGATGTGGCAATGTTCAATGCAATTCTTCGAGAATCTTATGATGAAATACCAACTGATCCTGTATCTGACGCTGTTAGTGATCCCAACGTTCTCCCCATTCCACCTGCAAAAATAAGCTTTGGAGCCGGTGCACAGCTAAAAACTGTGATTGGGACCTGGTCAAGATGGTTGAGTGAGCTATGTGGCATGGATGATGATGACTCAATTGAAGATAAAGCTGAAACTGATAACAATGAACAAAGACAAAATGCATCCTTAAAGCCCTTCAGTCTTCTCAATGCTCTAAGTGACCTCCTCATGCTTCCTAAGGATATGCTGTTAACTGCATCCATCAGGAATGAGGTATGCCCTATGCTCAATGCAACACTTATGAAGAAGATTCTACACAATTTTGTCCCAGATGAACTTTGCTCTGATCCTGTTTCCTCTGGTGTCTTTGAGGCTCTGGACTCAGAGAATGACATGGAAGATGGAAAGGAGCTTGTGAACAACTTTCCATGCATTGCAGCTCCCATTGTGTATTCACCTCCAACACCATCTTCCATTGCAAGCATTGTTGGGGAGATGGGAAGCAAATATCGTCATCTAAGAAGAAACAGATCATCAATTGTTAGGAAGTCTCACACAAGTGATGATGAGTTGGATGAATTGAAGTCCCCATTGTCTTCAATATTCTTGAGTGCTTCCTCATCCCAAAAAGTTTCCACAAAATCCACCTTCAACTTCAAAGAACTTAGCAACCAATCTCCTGTCAGATATGAACTCCTTAGGGATGTTTGGATCAACAGTGAGTAG 3213 0.409 MVLGMRGKNRRGFTVQVDFLIHIQEIKPWPPSQSLRSLRSVLIEWKNGECASGSTTLAAPSLGSVIGEGRIEFNESFRLHVTLLRDMSVRSGDTDVFQKNCLEFNLYEPRRDRTIKGQLLGTAIIDLAEYGTLKESLITSVPMNCKRSYRNTEQPLLFLKIQPLERNRASSSSKENNGGESVSALMNEEYAEEAEITSFTDDDVSSHSSAAAASPSLDSRGFTLLKLVKNEPTRNTNVNAKEHPFASETRLGNMNMMQQDTHQKLERSSYMSSLDVSSITRSVLNGHASNSPIHNSLSVQKFASLPSASSSSPSSTYENLDINPRSNTRSSGHETLDQSFQEKLANYRNIVADVKRNTNGSTFGIYSKQTSSQDRAQFTGKNPGFENCDATEYDEKLNGRCIEADKYSMKESGGDKVRHGSVEDISGNENYDLDRKNCMEDEKLEAQDAKDQASMDSNTYSFGGSNIAMQENNLKSERLKNIKSVRIPADTARNTGSLGSNHQAELNENGILGHSKNSGGNRNNERRDSKIHTKEARNGALDGKVEQLEKKIKMLEGELREAAAVESALYSVVSEHGNSTSKVHAPSRRLSRLYLHACKENFQGRRAGAAKSSVSGLVLVTKACGNDVPRLTFWLSNTVALRTIISRTIKDPSGSGRRRKAEEEGYGKITPSQRVKGLYPRKNENTALGYGGFGNWDDPQVLISALEKVEAWIFSRIIESIWWQILIPHMQHTKFNSKEVVSDSRKSYRRTSSSCDQEQGNLSLYIWKNAFREACERICPIRAGGHECGCLPMLSRLIMEQCVARLDVAMFNAILRESYDEIPTDPVSDAVSDPNVLPIPPAKISFGAGAQLKTVIGTWSRWLSELCGMDDDDSIEDKAETDNNEQRQNASLKPFSLLNALSDLLMLPKDMLLTASIRNEVCPMLNATLMKKILHNFVPDELCSDPVSSGVFEALDSENDMEDGKELVNNFPCIAAPIVYSPPTPSSIASIVGEMGSKYRHLRRNRSSIVRKSHTSDDELDELKSPLSSIFLSASSSQKVSTKSTFNFKELSNQSPVRYELLRDVWINSE 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01420 1070 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 529 1069 IPR021827 GO:0005643
Phco5g01420 1070 MobiDBLite consensus disorder prediction 305 335 - -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 488 519 - -
Phco5g01420 1070 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 140 IPR019448 -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 445 465 - -
Phco5g01420 1070 Coils Coil 531 565 - -
Phco5g01420 1070 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 451 465 - -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 195 215 - -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 520 542 - -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 485 542 - -
Phco5g01420 1070 MobiDBLite consensus disorder prediction 201 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01420 Phco-Chr5 49606087 49612027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01077 2 16972566 16978782 Phco5g01420 5 49606087 49612027 PCT