Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01300 ATGTCGTTTGTGACAGCACGTACTGGGCGACAACGACAGCGTTACGAAGACAACATGCGCCTCGTTTCCGGATGTATTCCCTACAGATGGAAAAAGGGAAAAGTAGATCAAAATGAAGATACTGAGGGGATGATAGAAGTACTTATGATTTCTTCACCAAAACGTGATGACCTTGTGTTTCCCAAGGGAGGATGGGAGGACGATGAAACTGTTACAGAAGCTGCTTGCCGTGAAGCCCTAGAGGAAGCAGGAGTTAAAGGGATGTTAAGAGAAGTTCCCTTGGGGAGATGGGAGTTCAGAAGCAAAAGCAGCAATGATTCATGTAGCCAGGAAGGATGGTGTAGAGGGTACATGTTTTCCTTAGAGGTGACTGAAGAACTTGAGACTTGGCCAGAGCAAAAAGACCATAATCGCCAATGGGTAAACATAAAAGAAGCATTCAGATTAAGCCGATATGACTGGATGTGCAAGGCATTGGAAGTGTTTTTAAGAGTTATGGAAGAGGACGGAAAGCTAAAGAAGGAGGAAAACAGTGTTGATTCTTCTTCAATGTCAGTGATAGATGTGTCAGAAAGTCAAATTGTGTCATCCAAATGCTATAAAAGAACCACTACCGCACAACATCATAGTATATTATCAAGAGCCAATATCCTGTCCCATGCTTCCCAGGAGATAGCTATTCACTTGGGTTATTGA 696 0.431 MSFVTARTGRQRQRYEDNMRLVSGCIPYRWKKGKVDQNEDTEGMIEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGMLREVPLGRWEFRSKSSNDSCSQEGWCRGYMFSLEVTEELETWPEQKDHNRQWVNIKEAFRLSRYDWMCKALEVFLRVMEEDGKLKKEENSVDSSSMSVIDVSESQIVSSKCYKRTTTAQHHSILSRANILSHASQEIAIHLGY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01300 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 168 - -
Phco5g01300 231 SUPERFAMILY Nudix 10 164 IPR015797 -
Phco5g01300 231 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Phco5g01300 231 Pfam NUDIX domain 40 155 IPR000086 -
Phco5g01300 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 4 166 - -
Phco5g01300 231 CDD Nudix_Hydrolase_9 21 155 IPR047198 GO:0016462
Phco5g01300 231 FunFam Nudix hydrolase 13 mitochondrial 4 165 - -
Phco5g01300 231 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01300 Phco-Chr5 47729601 47734537 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01094 2 21618006 21621667 Phco5g01300 5 47729601 47734537 PCT