Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g01094 ATGTCTTCTGTGCCAGCACGAACAGGGCGACAAAGACAGCGTTATGAAGATAATTTGCGCCTTGTCTCTGGATGTATTCCCTATAGATGGAGAAAGGACAACACAGATCTAATGGGAGAAACTGAGATAATAGAAGTACTAATGATTTCTTCACCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGCGAAGCTCTAGAGGAAGCAGGAGTTAAAGGAATACTGAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGTCAAGACTTGTGTAGCATTGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACATGGCCAGAGCAGAAAAATCGTGCTCGCCATTGGTTAAACATAAAAGAGGCATTCAGACTCAGCAGATATGACTGGATGTCTAATGCACTTGAAGCGTTTTTGAGAGTCATGGAAGAAGACAGAAAACTTGAGAAGAAAGACCAGAATACTGAACTTGAACCACCTTCAATTACAGTAGCAGATGTGCCAGAATGCCAAAGTATGTCATCTAACTGCTATAAAAGATCCTCTACCATGCAGCACCATGGCATGCCTCCTACGGCCACTCTTCTGTCACGTGCTACTCAAGAGATAGCCATCCACTTTGGTTATTGA 699 0.4378 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWRKDNTDLMGETEIIEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCSIEGGCRGYMFALEVTEELETWPEQKNRARHWLNIKEAFRLSRYDWMSNALEAFLRVMEEDRKLEKKDQNTELEPPSITVADVPECQSMSSNCYKRSSTMQHHGMPPTATLLSRATQEIAIHFGY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g01094 232 Pfam NUDIX domain 46 159 IPR000086 -
Phco2g01094 232 CDD Nudix_Hydrolase_9 21 154 IPR047198 GO:0016462
Phco2g01094 232 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 164 - -
Phco2g01094 232 SUPERFAMILY Nudix 13 169 IPR015797 -
Phco2g01094 232 ProSitePatterns Nudix box signature. 62 83 IPR020084 GO:0016787
Phco2g01094 232 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 167 - -
Phco2g01094 232 FunFam Nudix hydrolase 13 mitochondrial 4 164 - -
Phco2g01094 232 ProSiteProfiles Nudix hydrolase domain profile. 18 162 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g01094 Phco-Chr2 21618006 21621667 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g01094 2 21618006 21621667 Phco2g01094 2 21618006 21621667 ECH
Phco2g01094 2 21618006 21621667 Phco5g01300 5 47729601 47734537 PCT