Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00698 ATGGGAAAAGGTGGCTGCTGGGTGAGGGAGAGAGATTTGACCACGTTTTCTCCTTCCTTCCCAGATACCACCGCCAACCGTGTCTCTCAACCCTATAAATACTTTCCACAATTCCCTGTCTCTCACTCCATTCACAAACACCACAAAACCACAATTTTTCTAAGCAAAATAACAATGGAAACCCCAACCACACTCACCGCCGTCCTCCACCACGTCGCCGCCAAGTTTCCCTCCAACCGAGCGCTCTCTGTCGCCACCAAATTTGACCTCACCCACTCCCGCCTCCAACAACTGGCGGAATCCGCCGCCCAACGGTTGCTCGTTGCCGGAATCAAACCCGGCGACGTCGTCGCCCTCACCTTCCCCAACACCGTCGAGTTTGTTATCATGTTTCTAGCCGTTATTCGAGTGCGGGCCACAGCCGCGCCGTTGAACGCGGCTTACACAGCCGAAGAGTTCGAGTTTTACTTATCCGACTCCGAATCCAAACTTCTCCTAACATCCTTAGAAGGAAACGACTCAGCTCAAGCCGCAGCTTCAAAACTCAACATAGCTCACGCCACGGCTTCGATAACCAAAGCCGAGAATAACGAAGCCGAAATTAGTCTCTCGCTGAGTCACTCCGACTCGGTTGATTCGGTTGAGTCAGTGGTTAACGATCCCGATGACGTGGCGCTTTTCCTTCACACCTCCGGCACCACAAGCCGACCCAAGGGAGTGCCGCTCTCCCAGCACAACCTGCTCTCTTCCGTACAGAATATTAAATCGGTGTACCGACTCACTGAGTCAGACTCGACCGTGATTGTGCTTCCGCTTTTTCACGTGCACGGTTTGATCGCGGGGTTGCTGAGTTCCCTCGTCGCCGGGGCAGCGGTAGCGCTGCCGGCGGCGGGGAGATTCTCCGCCTCGACGTTCTGGAAAGACATGGTGAAATACAGCGCCACGTGGTACACTGCGGTCCCCACTATACACCAGATTATACTGGACCGGCACGCGAACAACCCCGAACCGGTTTACCCGCGGCTCCGGTTCATCCGAAGTTGCAGCGCGTCGCTGGCACCGGCTATTTTGGGTAAACTCGAGGAGGCTTTCTGTGCGCCGGTGTTGGAGGCTTATGCGATGACGGAAGCGTCGCATCTCATGGCTTCTAACCCTTTGCCGCAAGACGGGCCTCACAAGGCCGGGTCGGTTGGAAAGCCCGTGGGCCAAGAAATGGTTATTTTGGACCAAATGGGTCGGGTACAAGAGTCTGAAGTTAGCGGAGAAGTCTGCATTCGTGGCCCCAATGTTACGAAGGGGTATAAAAATAACGTGGATGCTAATACGGCGGCGTTTCAGTTTGGTTGGTTCCACACCGGAGATGTTGGTTACTTGGATTCTGATGGGTATTTGCACCTCGTTGGTCGCATCAAGGAACTCATCAACCGTGGAGGCGAAAAGATATCACCAATAGAAGTTGATGCTGTTCTGCTTTCACATCCGGACATTGCTCAAGCAGTTGCTTTCGGAGTGGCTGATGCCAAGTATGGTGAAGAGATATACTGTGCGATCATCCCAAGAGAAGGATCAAACGTTGACGAGGCAGAGGTGCTAAGATATAGCAAGAACAATCTTGCATCCTTCAAAGTTCCCAAAAAGGTCTTCATTACTGATTCTTTGCCCAAGACTGCCACCGGAAAGATTTTGCGTCGTTTTGTGGCAGAACACTTTGTCTCCCAAATTTGA 1725 0.527 MGKGGCWVRERDLTTFSPSFPDTTANRVSQPYKYFPQFPVSHSIHKHHKTTIFLSKITMETPTTLTAVLHHVAAKFPSNRALSVATKFDLTHSRLQQLAESAAQRLLVAGIKPGDVVALTFPNTVEFVIMFLAVIRVRATAAPLNAAYTAEEFEFYLSDSESKLLLTSLEGNDSAQAAASKLNIAHATASITKAENNEAEISLSLSHSDSVDSVESVVNDPDDVALFLHTSGTTSRPKGVPLSQHNLLSSVQNIKSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLVAGAAVALPAAGRFSASTFWKDMVKYSATWYTAVPTIHQIILDRHANNPEPVYPRLRFIRSCSASLAPAILGKLEEAFCAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMVILDQMGRVQESEVSGEVCIRGPNVTKGYKNNVDANTAAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVADAKYGEEIYCAIIPREGSNVDEAEVLRYSKNNLASFKVPKKVFITDSLPKTATGKILRRFVAEHFVSQI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00698 574 FunFam Peroxisomal-coenzyme A synthetase 64 469 - -
Phco5g00698 574 Pfam AMP-binding enzyme C-terminal domain 485 560 IPR025110 -
Phco5g00698 574 Pfam AMP-binding enzyme 70 476 IPR000873 -
Phco5g00698 574 Gene3D - 470 572 IPR045851 -
Phco5g00698 574 PANTHER ACYL-COA SYNTHETASE 62 571 - -
Phco5g00698 574 CDD FACL_fum10p_like 77 568 IPR045310 GO:0016874
Phco5g00698 574 Gene3D - 56 469 IPR042099 -
Phco5g00698 574 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Phco5g00698 574 SUPERFAMILY Acetyl-CoA synthetase-like 38 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00698 Phco-Chr5 7320476 7324376 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00698 5 7320476 7324376 Phco6g02475 6 46193493 46197633 ECH
Phco5g00698 5 7320476 7324376 Phco5g00698 5 7320476 7324376 ECH
Phco5g00698 5 7320476 7324376 Phco6g02475 6 46193493 46197633 PCT