Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00431 ATGAACGTGACAACATTCAACATTACCTTCAACTTGGGTACATTTAATGTTCTTGGATTCATTGATTCCTTGTTTGACGTGCACTGTGATGAGAAAGATGAACAGAAAATGCTTAGTCAAGATTTTCTCCTCCCACTTTCTCTCGTCCCTCCCTTTCTCTGTTTGCTCTTCCTTCGCCGTCACACATCGACAAACGGTAAAGGTTTTGCAAACATGAGTGGTAAAGCCTCCGTCTCCAAGGAACTCCATGCCAAGCACACAAAGATATTAGAGGGACTTGTTAAGCTACCCGACAACAGGGAATGTGCAGATTGCGGGACAAAGGCACCGCGATGGGCAAGTGTGAACTTGGGAATTTTCATATGCATGCAATGTTCAGGAATTCACCGGAGTCTTGGAGTACATATATCAAAGGTTCGATCCACAACTTTGGATACCTGGTTGCCCGATCAAGTTTCTTTTATGCAATTAGTGGGTAATGCAAGGTCAAATAAGCACTGGGAGGCAAACTTACCGCCAAATTTTGACAGAAATGGATATGGAATCGAGAGATTTATTCGTTTGAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGTGAACTTCAACCAGCTTCAAAGTCAGCTGAAATAATCTTTAACTCCAATGAGTCACCCGCTGCTGGGGCCAAGAGTGTTATTCAGAAGAATAGGAGATTGTCTCTTGAAGAAAGCATTCTTGTGAAACATATGAAACATGTTCCGCCTCCGGTAACAAGATCTCAGGAGCGGTCCTCTGTTCTTCAAAATAAGGTTTCACCTCCAATATTAAGGAGGCCGTCTGCATCCTTTGATTTTGACAGCTCCAGGTCGAAGAACAATGGTACTGTCGATCATTTTGGCATCTTTACGGTCCATGAGGCTAACCAGGAAGTCTCAACCACACCTCCTAGCTGGATAACGTTCGATTGTAAGATGGCAATACTTGTATTGCACATTTTTTGTTTAATATCCTTGCACTCTTCTTATTGGAACTAA 1014 0.426 MNVTTFNITFNLGTFNVLGFIDSLFDVHCDEKDEQKMLSQDFLLPLSLVPPFLCLLFLRRHTSTNGKGFANMSGKASVSKELHAKHTKILEGLVKLPDNRECADCGTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLVGNARSNKHWEANLPPNFDRNGYGIERFIRLKYVEKRWASKGELQPASKSAEIIFNSNESPAAGAKSVIQKNRRLSLEESILVKHMKHVPPPVTRSQERSSVLQNKVSPPILRRPSASFDFDSSRSKNNGTVDHFGIFTVHEANQEVSTTPPSWITFDCKMAILVLHIFCLISLHSSYWN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00431 337 ProSiteProfiles ARF GTPase-activating proteins domain profile. 87 208 IPR001164 GO:0005096
Phco5g00431 337 FunFam stromal membrane-associated protein 1 isoform X1 72 201 - -
Phco5g00431 337 SMART arf_gap_3 76 200 IPR001164 GO:0005096
Phco5g00431 337 Gene3D Arf GTPase activating protein 69 202 IPR038508 -
Phco5g00431 337 CDD ArfGap 90 190 - -
Phco5g00431 337 PRINTS HIV Rev interacting protein signature 99 118 IPR001164 GO:0005096
Phco5g00431 337 PRINTS HIV Rev interacting protein signature 118 135 IPR001164 GO:0005096
Phco5g00431 337 PRINTS HIV Rev interacting protein signature 139 160 IPR001164 GO:0005096
Phco5g00431 337 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 72 266 IPR044520 GO:0005096
Phco5g00431 337 SUPERFAMILY ArfGap/RecO-like zinc finger 86 197 IPR037278 -
Phco5g00431 337 Pfam Putative GTPase activating protein for Arf 88 198 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00431 Phco-Chr5 3937110 3942156 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00431 5 3937110 3942156 Phco5g00431 5 3937110 3942156 ECH
Phco4g03766 4 56958740 56966761 Phco5g00431 5 3937110 3942156 PCT