Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03766 ATGAACATGAACATGAACGGGAAAGCCTCCGTCTCTAAGGAGCTCAATGCCAAGCACGCCAAGATCTTGGAAGGACTTCTTAAGCTGCCCGATAACAGGGAATGTGCAGACTGCCGGAACAGGGCACCACGATGGGCTAGTGTTAACCTAGGGATTTTCATTTGCATGCAATGTTCAGGAATTCATCGAAGCCTTGGAGTTCATATATCAAAGGTGCGCTCCACAACTTTAGATACGTGGTTGCCAGAGCAAGTTTCTTTCATGCAATTTATGGGTAATGTAAAGTCAAATAAGCACTGGGAGGCAGAAATGCCACCAAATTTTGATAGAAGTAAATTGGCAATGGAGAAGTTTATCCGTATCAAGTATGTGGAGAAAATATGGGTTTCAAAAGATGAAATGCAATCAACATCAAATGGAGGGGCTAGGAAGGGTATTCTCAAGAACAACAGAAGACTTTCTCTTGAAGAAACCATTCTTGCAAACCACGTCTCAGAAATTGTACCACCAATAACAAGAGCTCGCGGGGTTTTTATAGACACACAAAAGAAGAATTCTCCTCCATTTAAAAGACCATCCTCATCTGTTGATTTTGACAAGTCCACAAAGAGCATCGGTACTGGGGACATTTTCAACTTGCTTTGCATCTATGACGATAACCAAAATTTCTCAACAGTGCCACCTTCAAGTTGGGCAACATTTGATTGTTTGTTAGAGTACAATGTTTTGAACGGACATTTTGGTGTTGAAATGGCGCATAGAATGGTTTGGTTTACATTGTAG 783 0.4138 MNMNMNGKASVSKELNAKHAKILEGLLKLPDNRECADCRNRAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPEQVSFMQFMGNVKSNKHWEAEMPPNFDRSKLAMEKFIRIKYVEKIWVSKDEMQSTSNGGARKGILKNNRRLSLEETILANHVSEIVPPITRARGVFIDTQKKNSPPFKRPSSSVDFDKSTKSIGTGDIFNLLCIYDDNQNFSTVPPSSWATFDCLLEYNVLNGHFGVEMAHRMVWFTL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03766 260 ProSiteProfiles ARF GTPase-activating proteins domain profile. 20 136 IPR001164 GO:0005096
Phco4g03766 260 SMART arf_gap_3 20 136 IPR001164 GO:0005096
Phco4g03766 260 Gene3D Arf GTPase activating protein 2 137 IPR038508 -
Phco4g03766 260 Pfam Putative GTPase activating protein for Arf 21 131 IPR001164 GO:0005096
Phco4g03766 260 SUPERFAMILY ArfGap/RecO-like zinc finger 20 130 IPR037278 -
Phco4g03766 260 PRINTS HIV Rev interacting protein signature 32 51 IPR001164 GO:0005096
Phco4g03766 260 PRINTS HIV Rev interacting protein signature 72 93 IPR001164 GO:0005096
Phco4g03766 260 PRINTS HIV Rev interacting protein signature 51 68 IPR001164 GO:0005096
Phco4g03766 260 FunFam stromal membrane-associated protein 1 isoform X1 5 134 - -
Phco4g03766 260 CDD ArfGap 23 123 - -
Phco4g03766 260 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 5 235 IPR044520 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03766 Phco-Chr4 56958740 56966761 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03766 4 56958740 56966761 Phco5g00431 5 3937110 3942156 PCT