Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g00240 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGTCTCTAGCTCCTTCCACCTTCTCTTCCTCCTCCTTTTCTCTTCTTCCCTCTTGCTTATCAAGTTCTTAAACTTCATTGCCAGCTTCACCATCTTCCAAAGAGATCACCACTATGAATATGTGTCTTCTGAGTATGATGAAGAAGAAGAAGAAGAAGAAGAAATTCAAGAAAGATACTCTTATGTGCATGATTCTGGTGAGTCAGATCACCTAGTAGCTGACATCATTTGTGGTGGAGAAGCCCTTTTGTTTGTGCACAACAACCACCCTCTGATGACTCATTCTTCTTCTGATGAATTCACGACTCCCCGGGATAGCCTTATTGAAGAAGATTCAGAAGAAAAGTATTCAACAGAAACCTTGTCTTTTCACAAGTCACCTTTGGTCTCAGACTTAGAAAATGAAGAAGAGACAGAAGAATTTCCAGCTGAAGATGCTGATTCTGTTCCAAATTCTGTACCGGATGAAAGCAGGCCCACATCGCCCATTACCCTGAACCTCTACAAAAGTGACTCACTTGACAGTGACAAAAACTATGACGAAGATTGTGTTGAAATTGGATTTAAAGTTGAAAACAAGAAGCCGCAAGAGGAAAGCCTCACACCAGATGAGAGATTCTTGGTCTATGCTCCTACCCAATTGGAGGCCAAGAAGCTCATTGTTGAGGAAAAGGATGATGAAGAAATATATGGTGACTCATGCACTGTTGGATCAACTTCCAAGAGTTCCTCTGAGTGGAGGAGCTCCATTAACTGCAGAGATTCTGGAACTGATGACCCTTTTTCTTCCTCATCAAGAAGAAGTTGCCCCAAGTGGGAATCATACACAGTTTTCCAAAAATATGATGAAGAAATGTCATTCCAAGATAGAATTAGTGCACAGAAACTTCAAGAAATTGAATCTTTAAGGTCTATCAAGGTATCTCCGAGGTCAATTTCAGAGCGCATTGTGTTCAAGTTTTCAAGTATGAATAAAAAACCAGGTGATACACGTCACAACCCATATCATGAACTTGAGGCTGCATATGTTGCACAAATTTGCTCAACATGGGAAGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAACGAGCTTCACGAGGCCATGATGTTGATGTGGGTTGTCCAGCCACCATTGCACAGAGATTACAACAATTTCAAGTGTTGTTGCAGAGATACGTAGAGAACGAGCCTTATGAGCATGGTAGAAGACCAGAGCTCTATGCTAGAGTGAGGCATTTGACTCCAAAATTGCTACTAGTACCAGAATATCGAGAATCAGAAGATGATCAGAGGGACGAAAATGGTTTTCAGTCGAAAATATCATCAGCTGCATTTCTTATTATAATGGAAGATGGGATCAGAACGTTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCATGTCAGATATTTACAGCTTACTTTAGGAGAAACCGAAGACCCTTGGTTGATCCAACACTTCTACGCCTCATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAGGACCTACGACGATCAAGAAAATGCTTGAGGAAGAGAAAGTTGAAGGGAGAAGAAGAGATGGAGATTTTGATGGCACTGATAGACCTGAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGTGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGAAAAGTAAAAGTGGTGGAAGGAAAACTACAAAGAGATTCCTCTCCACTTTTTTTCCCTGCACATTGA 1785 0.4056 MPCSKEEALVRLFYNVSSSFHLLFLLLFSSSLLLIKFLNFIASFTIFQRDHHYEYVSSEYDEEEEEEEEIQERYSYVHDSGESDHLVADIICGGEALLFVHNNHPLMTHSSSDEFTTPRDSLIEEDSEEKYSTETLSFHKSPLVSDLENEEETEEFPAEDADSVPNSVPDESRPTSPITLNLYKSDSLDSDKNYDEDCVEIGFKVENKKPQEESLTPDERFLVYAPTQLEAKKLIVEEKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFQDRISAQKLQEIESLRSIKVSPRSISERIVFKFSSMNKKPGDTRHNPYHELEAAYVAQICSTWEALNWNYKNFQSKRASRGHDVDVGCPATIAQRLQQFQVLLQRYVENEPYEHGRRPELYARVRHLTPKLLLVPEYRESEDDQRDENGFQSKISSAAFLIIMEDGIRTFMSFLKADKEKPCQIFTAYFRRNRRPLVDPTLLRLIKKVNQKKKMKVKDLRRSRKCLRKRKLKGEEEMEILMALIDLKVVSRVLRMSELSEEQLHWCEEKMRKVKVVEGKLQRDSSPLFFPAH 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g00240 594 MobiDBLite consensus disorder prediction 109 183 - -
Phco5g00240 594 Coils Coil 511 531 - -
Phco5g00240 594 MobiDBLite consensus disorder prediction 246 283 - -
Phco5g00240 594 MobiDBLite consensus disorder prediction 248 283 - -
Phco5g00240 594 MobiDBLite consensus disorder prediction 168 183 - -
Phco5g00240 594 Coils Coil 53 73 - -
Phco5g00240 594 PANTHER DNA LIGASE (DUF1666)-RELATED 12 594 - -
Phco5g00240 594 MobiDBLite consensus disorder prediction 118 135 - -
Phco5g00240 594 Pfam Protein of unknown function (DUF1666) 352 592 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g00240 Phco-Chr5 1964302 1967071 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00240 5 1964302 1967071 Phco5g00240 5 1964302 1967071 ECH
Phco4g03590 4 55817133 55819892 Phco5g00240 5 1964302 1967071 PCT