Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03590 ATGCTGCTATGTCCCAAAGAAGATGCACTTGTTAAACTATTCTACAATGTCTCAAGCCCTTTCCACCTTCTCTTTCTCCTTCTCTTCTCCTCTGCCATTTTCCTTCTCACCTTCTTAACCTTCACAGGCAGATACCCCTTTATCCAAAGGGATCAAGAATATGAATATGTGTATACCGAGGATGAGGAAGAAGAAGAAACTCAAGAAGGGTATTCTTGTGTTGATTCTACCGAGGGAGAAAACATCACTTGTGGGAAGGAAGTTCGTGTGTTTGTGCACAATGAGAGGCATCAAAGGACTCATTCTTATTCTGAAGAATTCATAAGCCCCAGAGAGAGCTTGGATGAAGAGTCGGAGGAAAAGCATTATTCTGAAACGTTGTCTCTCCACAAGTCACCACAAGTTTCTTACTTCGACAATGAAGAGGCAGAAACGGTTGAAGAAGACTTTACAGCAAGAGATTCTGATTCTGTTCCAAATTCTGCCCAAGTTGAAAACAGGACCACCTCCCCCCACAACCTCAATGCATACAAAAGAAACAAAAACCATGATGACGATCACGTTAGCGTTGAAATTATTAAAAACAAGAAGGTGCAAGAGCCAAACCTTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAGTTGCAGAGTAAGAAGTTGATGGTTGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCCATCAACTGCAGGGATTCCGAGACTGAGGATGCATTTTCTTCCTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTTCAAAAATATGATGAAGAAATGGCAATCTTAGACAGAATTAGTGCACAGAAACTTCATGAAACCGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAAACTATAAATAAAAAACCCGCTGATGTTGGTCATAACCCATATCGTGAACTAGAGGCTGCATATGTAGGACAAATTTGCTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGACCATGATACCGGTTGTTCTGCCACAGTTGCTCAGCAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCATGGTAGAAGACCTGAAATCTATGCTAGAATGAGACTTTTGGCACCCAAATTGCTCCTAGTGCCAGAATATCAAGAATTAGAGGAGGATCAGAAGGATGGTGGTTTTCACTGCAAAATATCGTCAGCTTCATTTCTAAAGATAATGGAGGATGGAATCAAAACATTCATGAATTTTCTAAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTTAGGAGAAACCAAAGAGGCACAGTTGATCCAACACTACTCCGACTAATGAAGAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGCAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTCACAGACCTAAAAGTGGTGTCAAGGGTTTTAAGGATGAATGAATTGAGTGAAGAACAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCACTCCACTTTTCTTCCCCTCACATTGA 1689 0.4109 MLLCPKEDALVKLFYNVSSPFHLLFLLLFSSAIFLLTFLTFTGRYPFIQRDQEYEYVYTEDEEEEETQEGYSCVDSTEGENITCGKEVRVFVHNERHQRTHSYSEEFISPRESLDEESEEKHYSETLSLHKSPQVSYFDNEEAETVEEDFTARDSDSVPNSAQVENRTTSPHNLNAYKRNKNHDDDHVSVEIIKNKKVQEPNLARDERFFVFASTQLQSKKLMVEEKDDESSKWKSSINCRDSETEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTINKKPADVGHNPYRELEAAYVGQICLTWEALSWNYKNFRSKHASRQDHDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQELEEDQKDGGFHCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLRLMKKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMNELSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03590 562 MobiDBLite consensus disorder prediction 102 126 - -
Phco4g03590 562 Pfam Protein of unknown function (DUF1666) 325 560 IPR012870 -
Phco4g03590 562 PANTHER DNA LIGASE (DUF1666)-RELATED 13 562 - -
Phco4g03590 562 MobiDBLite consensus disorder prediction 148 182 - -
Phco4g03590 562 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03590 Phco-Chr4 55817133 55819892 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03590 4 55817133 55819892 Phco4g03590 4 55817133 55819892 ECH
Phco4g03590 4 55817133 55819892 Phco5g00240 5 1964302 1967071 PCT