Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03396 ATGTCAATTGCTGAGTTTGCGTTGAGTACAGTTATCAAAGAGAAAGGGCAATGGGAAGGACAACCGGGACATTGTTCTGATGAGCCAATCTTGATTTATCTCACGGTGGATGGCGCTGTGACCCCAATGCGCGTGTTGGAGTCTGATTCCATTGCTTCGGTGAAACTGAGGATTCAGCAGTGCAAAGGCTTCGTGGTGAAAAAGCAGAAGTTGGTTTTTGGTGGCAGAGAGCTAGCTCGCAGTGGCACACTTATCAAGGAGTATGGTGTCGCTGATGGCAATGTTCTTCACATGGTTCTTCGCCTCTCTGATCTTCTTTTCATTGTCGTGAGGACCGTTTCTGGGAAGAAGTTTGAGTTCCACATCGATAGACACCGAAATGTGGGTTATCTGAAGCAACGCATTAGAAAAAAAGGGGATGGTTTCATTGATCTTGAGGATGATCAAGAGCTTTTCTGCAATGATGAGAAGCTCGATGACCAGAGAGTCTTCCATGACATATGCAAGAGTGACGACGATGTGATTCATTTGATAATTAAGAAATCGGCCAAGGTTAAGACCACACCGATTCGCCAGGATTTGAAGCTCTCCGTGAAGGCAACAGGTGAGAGAATAAAACTTAATAGGGACAAACATGTTCAGATAGCAAATGTGCTACCAGATGTATGTTTCTGGTTGGAACCAATTATTCTGAATCCCAAGATCAATTTTCTTCCTTTCCTTTGGGATATGATACACTCCACATTTGAAGGTTTGAAGAGAGGAAATGACCCTATTAGGTCCTCTGAGGGCACTGGAGGGACTTACTTCATGCAAGATTCAACAGGTCAGGAGTATGTTTCTGTTTTTAAGCCAATGGACGAGGAACCGATGGCTGTGAACAACCCAAGAGGTCTTCCATGTTCACCCAATGGCGAAGGTTTGAAAATAGGGACAAAGGTTGGTGAAGGAGCCTTGAGGGAAGTTGCAGCATACTTGTTGGATCATCCAAAGAGTGGGCCACGTTTGTTGTCAGGTGAAGAAGTAGGGTTTTCTGGTGTTCCCCCTACTGTAATGGTGCAGTGCCTGCACAAAAAGTTTAACCACCCAAATGGGTTTTCTTGCTCCTCAAAAGATGTTAAGATCGGGTCACTGCAGAAGTTCACTAGTAATGATGGTAACTGTGAGGACTTTGGACCCTGGGCTTTCCCAGTGGAGGAGGTGCATAAGATTACTGTGCTTGATATAAGATTGGCCAATGCAGACAGGCATGGTGGGAATATATTGATCAGAAAGGAGGCAGGTGGCCAGATAAAGCTCATTCCTATTGATCATGGCTACTGTCTACCTGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCGCAAGCGCGTCAGCCTTTCTCTCCTGAGACAGTTGAATATATAAATTCTCTGGATGCTGAAAAAGACTTGGAGCTTTTAAAATGTTATGGTTGGGATATTCCGCTTCAGTGTGCTAGAACACTTCGCATTTCCACAATGTTGCTGAAGAGAGGGGTTGAGAGAGGCCTTACTCCCCATGAAATTGGAAGCATTATGTGTCGGGAAAATTTGAACAAGGAATCTGTGATTGAAGAGATTATCATGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGAACCAGAGTTTATTGAAGCCATCTCACGGAGCATGGATTCCCACCTTGATAAGATTGCAATCTAG 1713 0.4448 MSIAEFALSTVIKEKGQWEGQPGHCSDEPILIYLTVDGAVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARSGTLIKEYGVADGNVLHMVLRLSDLLFIVVRTVSGKKFEFHIDRHRNVGYLKQRIRKKGDGFIDLEDDQELFCNDEKLDDQRVFHDICKSDDDVIHLIIKKSAKVKTTPIRQDLKLSVKATGERIKLNRDKHVQIANVLPDVCFWLEPIILNPKINFLPFLWDMIHSTFEGLKRGNDPIRSSEGTGGTYFMQDSTGQEYVSVFKPMDEEPMAVNNPRGLPCSPNGEGLKIGTKVGEGALREVAAYLLDHPKSGPRLLSGEEVGFSGVPPTVMVQCLHKKFNHPNGFSCSSKDVKIGSLQKFTSNDGNCEDFGPWAFPVEEVHKITVLDIRLANADRHGGNILIRKEAGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQARQPFSPETVEYINSLDAEKDLELLKCYGWDIPLQCARTLRISTMLLKRGVERGLTPHEIGSIMCRENLNKESVIEEIIMEAQDSLLPGMEEPEFIEAISRSMDSHLDKIAI 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03396 570 Pfam Phosphatidylinositol 3- and 4-kinase 264 517 IPR000403 -
Phco4g03396 570 SUPERFAMILY Protein kinase-like (PK-like) 411 568 IPR011009 -
Phco4g03396 570 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
Phco4g03396 570 FunFam Phosphatidylinositol 4-kinase gamma 4 27 106 - -
Phco4g03396 570 ProSiteProfiles Ubiquitin domain profile. 106 184 IPR000626 GO:0005515
Phco4g03396 570 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 255 552 IPR000403 -
Phco4g03396 570 SMART ubq_7 106 180 IPR000626 GO:0005515
Phco4g03396 570 SMART ubq_7 30 101 IPR000626 GO:0005515
Phco4g03396 570 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Phco4g03396 570 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 40 543 IPR044571 -
Phco4g03396 570 Gene3D - 23 104 - -
Phco4g03396 570 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
Phco4g03396 570 CDD Ubl_ubiquitin_like 108 178 - -
Phco4g03396 570 Gene3D - 107 197 - -
Phco4g03396 570 SUPERFAMILY Ubiquitin-like 102 181 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03396 Phco-Chr4 54284600 54286820 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00227 4 1426279 1428281 Phco4g03396 4 54284600 54286820 PCT