Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03385 ATGGGTCAATTGGCTTTTGAAAACACTGTTCATCTTATAATAGAAAACATGTATGAGACTTTAAATCTTCTAACAGTATTAGAAAAAAGGTTCATCGTTGAAGTGGAGAAAGCCACTGAGGCCACAGAAGAAAGGCCATCCATGGGTCCTGTCTACCGTAGCGTTTTCTGCAATGATCCAATTCCTCCTCCCATACAAGGTCTTGATACATGCTGGGATATTTTTAGGATGTCCGTCGAGAAATATCCTACAAACCGAATGCTTGGTGTTCGTGAAATTGTGGATGGGAAACCTGGCAATTACAAGTGGCAAACTTACAAAGAGGTGTACGACATGGTGGTCAAGGTTGGAAATTCCATTCGTGCTTGTGGTTATGGGGAGGGAGTAAAATGTGGTATTTATGGTGCCAATAGCCCAAAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTTTTCTGTGTTCCTTTATATGATTCCTTGGGTGCTGGGGCTGTTGAATTTATTATAAGCCATGCAGAGGTCTCAATTGCGTTTGTTGAAGAAAAGAAGATACCCGAGCTGTTGAAGGCATTTCCAAATGCAGCAAACTATGTCAAGACAATTGTGAGCTTTGGAGATGTTACCCCTGAACAAAAGCAAGAAGTTGAAAACTTTGGGTTGACCATGTATTCTTGGGATGACTTTTTGAAAGTGGGTCATGATCAGACTTTTGAGCTTCCTGTGAAAAAGAAAAGTGATGTATGTACAATAATGTACACCAGCGGAACTACTGGTGAACCTAAGGGGGTATTGATATCCAATGAAAGCATTATCACACTTTTAGCTGGGATTCATAAAGTTCTGAAGAGTTGCAATGAGAAATTGAATGACAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGACAGGGTCATTGAGGAGGCAATGATAATGCACGGTGCTTCAATAGGTTTCTGGCGTGGAGATGTCAGATTATTACTAGAAGACATTGCGGAGCTAAAGCCAACCATTTTCGTTGCAGTTCCCCGTGTGCTTGATAGAGTATACAATGGTTTGACACAGAAGATTTCTACAGGGGGCTTTATAAAACAGACAGTGTTCAATTTCGCCTACTCATACAAGTTGAGTAACATATGTAAAGGGAAAAGTCATGAGGAAGCATCTCCACTATTTGACAGAATTGTATTTAATAAGGTAAAGCAAGCTTTAGGGGGAAGAGTGCGTATTATTTTATCTGGAGCAGCACCTCTATCTAAACATGTGGAAGGTTTTCTACGGGTGGTCACTTGTGCTCATATCCTACAAGGATATGGTCTAACTGAAACCTGTGCGGGAACCTTTGTGTCCTTACCAAACGAAAAGGACATGCTTGGTACAGTGGGGCCTCCTGTACCATATGTGGATGTGTGCTTAGAATCTATTCCTGAAATGGGATATGATGCACTTGGAAGCACACCAAGTGGAGAAATATGTGTGAGGGGAAAAACTGTATTCACAGGGTACCACAAACGTGAAGACCTAACCAAAGACGTTATGATCAATGGATGGTTCCACACAGGGGATATTGGAGAATGGCAACCTAATGGAGCCATGAAAATTGTTGATAGGAAAAAAAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACACCTGGAGAATATTTATATTCAAGCTTCTGTTGTTGATGCTATATGGATTTATGGAAATAGTTTCGAGTCATACCTAGTTGCTATTGTTAACCTTAACAAGCCAACGATTGAACAATGGGCAGAAGAAAATAATATCACTGCAGACTTTGATTCTCTCTGTGGAGATTCTAGAACAAAAACTTACGTAATCGGAGAGCTTGTCAAGATTGCAAAGGATAAGAAGTTAAAAGGTTTTGAGTTTATTAAAGCTGTTCATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCGACATTTAAGAAGAAAAGACCTGAATTGCTTAAATACTATAAGAATACCATTGACGACATGTATAAAACACTGAACACACCCAACAAATCCAATGCCTAA 2073 0.3994 MGQLAFENTVHLIIENMYETLNLLTVLEKRFIVEVEKATEATEERPSMGPVYRSVFCNDPIPPPIQGLDTCWDIFRMSVEKYPTNRMLGVREIVDGKPGNYKWQTYKEVYDMVVKVGNSIRACGYGEGVKCGIYGANSPKWIMSMEACNAHGLFCVPLYDSLGAGAVEFIISHAEVSIAFVEEKKIPELLKAFPNAANYVKTIVSFGDVTPEQKQEVENFGLTMYSWDDFLKVGHDQTFELPVKKKSDVCTIMYTSGTTGEPKGVLISNESIITLLAGIHKVLKSCNEKLNDKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDVRLLLEDIAELKPTIFVAVPRVLDRVYNGLTQKISTGGFIKQTVFNFAYSYKLSNICKGKSHEEASPLFDRIVFNKVKQALGGRVRIILSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVCLESIPEMGYDALGSTPSGEICVRGKTVFTGYHKREDLTKDVMINGWFHTGDIGEWQPNGAMKIVDRKKNIFKLSQGEYVAVEHLENIYIQASVVDAIWIYGNSFESYLVAIVNLNKPTIEQWAEENNITADFDSLCGDSRTKTYVIGELVKIAKDKKLKGFEFIKAVHLDPVPFDMERGLMTPTFKKKRPELLKYYKNTIDDMYKTLNTPNKSNA 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03385 690 SUPERFAMILY Acetyl-CoA synthetase-like 67 684 - -
Phco4g03385 690 Pfam AMP-binding enzyme 91 549 IPR000873 -
Phco4g03385 690 CDD LC-FACS_euk 99 680 IPR045311 GO:0004467|GO:0006631
Phco4g03385 690 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 679 - -
Phco4g03385 690 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Phco4g03385 690 Gene3D - 67 541 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03385 Phco-Chr4 54205260 54213931 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00241 4 1504727 1513566 Phco4g03385 4 54205260 54213931 PCT