Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00241 ATGGCACAGAAGAGATACATCGTTGAGGTGGAGAAAGCGGAGGAGGCGACCGAAGGAAGGCCGTCGAGAGGACCTGTGTACCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCTGTAGAAGGTCTCAATTGCTGCTGGGATGTTTTCCGAATGTCTGTTGAGAAATATCCAACTAGTCCAATGCTTGGTCATCGGGAAATTGTGGATGGGAAGGCAGGTAAGTACAAGTGGTTAACATACCAAGAAGTATATGACCTGGTGATTAAAGTTGGGAATTCCATCCGCTTCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTACGGTGCCAATTCTGCAGAATGGATTATGAGCATGGAGGCGTGCAATGCTCATGGACTGTATTGTGTTCCTTTATATGATACATTGGGTGCTGGAGCTGTAGAGTTTATTATATGCCACGCAGAGGTCTCGATTGCATTTGCAGAAGAAAAGAAGATACCCGAGCTATTGAAGACATTTCCAAATGCAACAAAGCATCTCAAGACAATTGTAAGCTTCGGTAAGGTTACCCATGAACAAAAGCAAGAAGTTGAGAAGTTTGGGTTGGCAATATATTCATGGGATGAATTTTTACAAGTGGGTCAAAATAAGAGTTATGATCTTCCAATTAAGAAAAGGAGTGACATCTGTACCATAATGTATACTAGTGGAACAACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTCTCTTGGCCGGGGTAAAGCGACTGTTGGAGAGTGTCAATGAGCAATTGAGTGAGAAGGATGTGTACATATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAAACATTCATATGGCATGGTGCTTCAATAGGTTTCTGGCGTGGGGATGTAAAATTGTTAATTGAAGATATTGGGGAACTAAAACCAACTATTTTCTGTGCTGTTCCCCGTGTGCTTGATAGAGTGTACTCAGGTTTGACACAGAAGATTTCTTCTGGGGGCTTCTTAAAGAAGATATTATTCAACTGTGCTTATTCATATAAGCTGAATAACATGAAGAAAGGGTTTACACATGGAGAGGCATCCCCTATTTGTGATAAAATTGTATTTGAGAAGGTAAAGCAGGGTTTAGGAGGTAGAGTTCGCCTTATTTTGTCTGGAGCAGCACCTTTATCTGCGCATGTGGAAGCTTACTTACGGGTGGTGACTTGTTGTCATGTTCTACAAGGATACGGCCTGACTGAAACCTGCGCGGGAACCTTTGTCTCATTACCAAATGAAATGGAAATGCTTGGAACAGTGGGCCCTCCTGTACCAAATGTTGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCACACCAAGAGGAGAAATTTGTGTAAAGGGTAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGACCTCACCAAAGAGGTTCTGATCGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATAGGAAAAAAAATATATTTAAACTTTCACAAGGAGAATATGTTGCTGTCGAAAACCTGGAGAACATTTATGGTCAAGTTTCATCTATTGAATCTATATGGGTTTATGGAAACAGTTTCGAGGCCTTCCTTGTTGCCGTTATTAATCCCAGAAAGGAAGCACTTGAACAATGGGCACAAGAAAATGCTATATCCATGGACTTCAATTCTCTCTGTGAAGATGCTAGAGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGCAAAGGCAAAGAAGTTGAAAGGTTTCGAGTTTATAAAAGGAGTTCATCTTGACCCGATTCCATTTGACATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCACAGTTGCTCAAATTTTATCAGAATGTTATTGACAACATGTACAAAAGTGGAAAGTAA 1977 0.4127 MAQKRYIVEVEKAEEATEGRPSRGPVYRSLFAKDGFPAPVEGLNCCWDVFRMSVEKYPTSPMLGHREIVDGKAGKYKWLTYQEVYDLVIKVGNSIRFCGYGEGVKCGIYGANSAEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFAEEKKIPELLKTFPNATKHLKTIVSFGKVTHEQKQEVEKFGLAIYSWDEFLQVGQNKSYDLPIKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEQLSEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLDRVYSGLTQKISSGGFLKKILFNCAYSYKLNNMKKGFTHGEASPICDKIVFEKVKQGLGGRVRLILSGAAPLSAHVEAYLRVVTCCHVLQGYGLTETCAGTFVSLPNEMEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGQVSSIESIWVYGNSFEAFLVAVINPRKEALEQWAQENAISMDFNSLCEDARAKSYILEELSKIAKAKKLKGFEFIKGVHLDPIPFDMERDLITPTYKKKRPQLLKFYQNVIDNMYKSGK 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00241 658 Gene3D - 42 516 IPR042099 -
Phco4g00241 658 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Phco4g00241 658 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Phco4g00241 658 SUPERFAMILY Acetyl-CoA synthetase-like 42 655 - -
Phco4g00241 658 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 654 - -
Phco4g00241 658 Pfam AMP-binding enzyme 65 524 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00241 Phco-Chr4 1504727 1513566 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00241 4 1504727 1513566 Phco4g00241 4 1504727 1513566 ECH
Phco4g00241 4 1504727 1513566 Phco4g03385 4 54205260 54213931 PCT