Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03316 ATGGGTTTCCCAGTGGGCTACACGGAGCTTCTCTTCCCGAAGCTTCTCCTCCAACTCCTCTCCCTCTTGGGCTTCCTCCGGAGGCTCATTAGCACCCTCCTCCGCTTCATGGGCCTCCACGATTTCCTCGAGCCCGACATTGCCTGGCCCGAAGCCCACACCCGAATGCCAGAATTCGAATCCGTCTCCGCCACGCTTATCCGGGAAATCCTCCCCGTAGTCAAGTTCCGTGACCTCCTTGACCCACCCGAAACCTGCGCCGTCTGTCTCACGGAGTTCGAGAAAAACGATGAGATCAGACGGCTAGCCAATTGTCGACACATATTCCACCGAGGATGTTTGGACCGTTGGATGGGGTACGATCAGAGAACGTGCCCTCTTTGCAGAACACCCTTTATACCTGACGATATGCAAGGTACCTTCATTGAAAGACTCTGGGCTGCGTCTGGGATCTCTGAACATCCCCTTGTTTCTGCTTCCTAG 483 0.5528 MGFPVGYTELLFPKLLLQLLSLLGFLRRLISTLLRFMGLHDFLEPDIAWPEAHTRMPEFESVSATLIREILPVVKFRDLLDPPETCAVCLTEFEKNDEIRRLANCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPDDMQGTFIERLWAASGISEHPLVSAS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03316 160 Pfam Ring finger domain 85 129 IPR001841 -
Phco4g03316 160 SMART ring_2 86 128 IPR001841 -
Phco4g03316 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 132 IPR013083 -
Phco4g03316 160 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Phco4g03316 160 SUPERFAMILY RING/U-box 67 135 - -
Phco4g03316 160 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03316 Phco-Chr4 53672664 53673146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00300 4 1906518 1906994 Phco4g03316 4 53672664 53673146 PCT