Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00300 ATGGGCTTTCCAGTCGGCTACACAGAACTGCTACTACCCAAGCTGCTTGTGCAGCTGCTATCCCTATTGGGCCTCATCAGGAAACTCGTCACCCTCCTCCTGTGCTACATGGGCTTCCACGATTTCTTCCAACCCGACATTGCCTGGCCGGAGAGGCTCCCGGAATTGCAGTCCATGTCCGCGGTGCTGATCCGGGAAATCCTGCCGGTGGTGAAGTTCTCGGAGATGGAGGAGGCGGAGGCGGCGGAGAGTTGCGCGGTGTGTCTGTACGAGTTCGAGGGAGAGGACGAGATCAGACGGCTGACAAACTGCCGCCACATATTCCACAGAGGGTGTCTGGACCGTTGGATGGGGTACGATCAAAGAACGTGCCCCCTCTGTCGGACGCCCTTCATACCCCACCACATGCAAGCTGCCTTCAATGATAGACTGTGGGCTGCTTCAGGGATCCCTCAATTCTATTACCACGATGAATGA 477 0.5681 MGFPVGYTELLLPKLLVQLLSLLGLIRKLVTLLLCYMGFHDFFQPDIAWPERLPELQSMSAVLIREILPVVKFSEMEEAEAAESCAVCLYEFEGEDEIRRLTNCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPHHMQAAFNDRLWAASGIPQFYYHDE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00300 158 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 148 - -
Phco4g00300 158 Pfam Ring finger domain 84 128 IPR001841 -
Phco4g00300 158 SUPERFAMILY RING/U-box 68 134 - -
Phco4g00300 158 ProSiteProfiles Zinc finger RING-type profile. 85 128 IPR001841 -
Phco4g00300 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 134 IPR013083 -
Phco4g00300 158 SMART ring_2 85 127 IPR001841 -
Phco4g00300 158 FunFam RING-H2 finger protein ATL73 64 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00300 Phco-Chr4 1906518 1906994 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00300 4 1906518 1906994 Phco4g00300 4 1906518 1906994 ECH
Phco4g00300 4 1906518 1906994 Phco4g03316 4 53672664 53673146 PCT