Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03283 ATGGCCACTCAACCCACCAACCATCCAAAGTCTGTTTACGATTTTACTGTCAAGGATACCAAAGGTGATGATGTCGATCTTGTCACTTACAAGGGAAAAGTATTGGTCATTGTTAATGTTGCTTCCAAATGTGGAATGACCAACTCAAATTATGTGGAGTTGAATCAACTACATGAGAAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAAGAACCTGGAAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGGAACAATTCTGCTCCTTTATATAAATTCTTGAAGTCAGGTAAGTGGGGAATATTGGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAGGATGGGCAAGTGATAGATCGCTATTATCCCACCACATCTCCTCTTAGCCTTGAGCGAGACATACGTAAGCTACTTGGTATTGTATGA 513 0.4016 MATQPTNHPKSVYDFTVKDTKGDDVDLVTYKGKVLVIVNVASKCGMTNSNYVELNQLHEKYKDKGLEILAFPCNQFGEEEPGSNDQIKEFVCTRFKSEFPIFDKIEVNGNNSAPLYKFLKSGKWGILGDDIQWNFAKFLVDKDGQVIDRYYPTTSPLSLERDIRKLLGIV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03283 170 Gene3D Glutaredoxin 1 169 - -
Phco4g03283 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Phco4g03283 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Phco4g03283 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Phco4g03283 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Phco4g03283 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 FunFam Glutathione peroxidase 3 169 - -
Phco4g03283 170 PIRSF Glutathion_perox 1 168 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Phco4g03283 170 PANTHER GLUTATHIONE PEROXIDASE 6 167 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03283 Phco-Chr4 53373714 53375275 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03283 4 53373714 53375275 Phco4g03283 4 53373714 53375275 ECH
Phco4g00318 4 2028527 2034661 Phco4g03283 4 53373714 53375275 PCT