Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00318 ATGTTTGCAAATACGACAAGAAGCCCGCAACGTGTGCAAACTTCCTCTTCCACTCATACTTACACCATGACCACCGTTTCCTCCAAGGATTCAAAGTCCGTGTACGATTTCTCCGTCAAGGATGCTAAGGGAGATGTTGTAGATCTCTCCACTTACGATGGAAAAGTCCTGTTGATTATCAATGTTGCTTCTAAATGCGGCTTGACCAACTCCAATTATTCGGAGCTGAATGAATTATATGTGAAGTATAAAGATAAAGGCTTGGAGATTCTGGCATTTCCCTGTAACCAATTTGGTGAGCAAGAACCAGAAAGCAATGATAAAATTGTGGATTTTGTCTGCACTCGTTTCAAATCTGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGGGGCAATTCAGCTCCTCTGTATAAATTCTTGAAGTCCGGCAAATGGGGAATTTTTGGTGATGATATTCAGTGGAACTTTGCCAAGTTTGTGGTTGATAAGAAGGGACAAGTAGTGGGTCGCTATTATCCCACGACTTCTCCTCTTAGCCTTGAGAGAGACATCCGTCAACTTCTGGGTATTTCATGA 579 0.418 MFANTTRSPQRVQTSSSTHTYTMTTVSSKDSKSVYDFSVKDAKGDVVDLSTYDGKVLLIINVASKCGLTNSNYSELNELYVKYKDKGLEILAFPCNQFGEQEPESNDKIVDFVCTRFKSEFPIFDKIEVNGGNSAPLYKFLKSGKWGIFGDDIQWNFAKFVVDKKGQVVGRYYPTTSPLSLERDIRQLLGIS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00318 192 PANTHER GLUTATHIONE PEROXIDASE 27 189 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 ProSiteProfiles Thioredoxin domain profile. 28 190 IPR013766 -
Phco4g00318 192 ProSitePatterns Glutathione peroxidases signature 2. 91 98 IPR029760 -
Phco4g00318 192 PRINTS Glutathione peroxidase family signature 88 104 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 PRINTS Glutathione peroxidase family signature 52 69 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 PRINTS Glutathione peroxidase family signature 153 162 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 ProSitePatterns Glutathione peroxidases active site. 54 69 IPR029759 -
Phco4g00318 192 CDD GSH_Peroxidase 33 185 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 PIRSF Glutathion_perox 5 191 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 Gene3D Glutaredoxin 23 192 - -
Phco4g00318 192 SUPERFAMILY Thioredoxin-like 33 189 IPR036249 -
Phco4g00318 192 Pfam Glutathione peroxidase 34 142 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 ProSiteProfiles Glutathione peroxidase profile. 24 192 IPR000889 GO:0004602|GO:0006979
Phco4g00318 192 FunFam Glutathione peroxidase 25 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00318 Phco-Chr4 2028527 2034661 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00318 4 2028527 2034661 Phco4g03283 4 53373714 53375275 PCT