Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03259 ATGCACCATATTCGAAAATGCAAAGTGAGTAACGGCAAAAAGTCTTTGCTTCCATTCACGATGGCGTTGCAGGAGAGGTTGGACAAGTTCAAGAAGCAGCAAGAAAAGTGCCAAACGACACTGTCAAGCATTGCAGCAAGCAAGGCCGCAGCAAGCCAAAAATCTGCCGCACATGGCTCGGCCAACGGAAGAAACGCGCCCCCTGCGGTTAAGTTTTCGAACGACACGGAGAGGCTTCAGCATATTAACAGCATACGTAAAGCCCCTGTGGGTGCTCAGATGAAGCGTGTTATTGACCTCCTTCTAGAGACAAGACAAGCTTTAACACCGGAGCAAATAAACCAGGCATGCTATGTTGACATAAAGGCTAACAAAGATGTCTTTGAGAATCTTAGGAAAAACCCAAAAGTGAATTATGACGGCCTACGATTCTCTTACAAGTCAAAGTATGGTCTTAAGGACAAAACAGAACTTCTTCAACTGATACGTAAGTATCCTGAGGGCCTTGCTGTTATTGACTTAAAGGATGCTTACCCCACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTGTAGGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAACGACCCCAAATTGCACATTAAGGTGGATGATGATCTAAAACAGCTTTTCCGGAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATTTCTTCCAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATCAACAAGAGAACGAAGCTGACCAATGCCCATCTTCCAGAGCTTTTTCAAAACTTGAACAATTCCTGA 900 0.4467 MHHIRKCKVSNGKKSLLPFTMALQERLDKFKKQQEKCQTTLSSIAASKAAASQKSAAHGSANGRNAPPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINQACYVDIKANKDVFENLRKNPKVNYDGLRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAVGQIWLLSNFDSQEDIAYPNDPKLHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEINKRTKLTNAHLPELFQNLNNS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03259 299 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 78 153 IPR003166 GO:0006367
Phco4g03259 299 Pfam TFA2 Winged helix domain 2 153 210 IPR040501 -
Phco4g03259 299 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 21 297 IPR016656 GO:0005673|GO:0006367
Phco4g03259 299 MobiDBLite consensus disorder prediction 245 299 - -
Phco4g03259 299 MobiDBLite consensus disorder prediction 246 265 - -
Phco4g03259 299 Pfam TFIIE beta subunit core domain 92 150 IPR003166 GO:0006367
Phco4g03259 299 PIRSF TFIIE-beta 20 298 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03259 Phco-Chr4 53230174 53233376 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03259 4 53230174 53233376 Phco4g03259 4 53230174 53233376 ECH
Phco4g00336 4 2148436 2152360 Phco4g03259 4 53230174 53233376 PCT