Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00336 ATGGCGTTTCAGGAAAAGGCAAACAGGTTTAAAAGGCAGCCAGAGAAGAATTCCTCTGCTTCAAACAATGGAAGAACTCCAGGTGCTGTCAAATTCTCTACCGACACGGAAAGACTTCAACATGTTAATAGCATACGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACCCGAAAGGCTTTAACGATGGAGCAAATAAATGAAGCGTGTTACGTGGACATGAGAGCTAATAAAGATGTTTTTGAAAGTATGAGGAAAAACCCAAAAATAAAATATGATGGGGAAAAATTCTCTTACAAGTCCAAGCACGATGTCAGGGACAAAAGTCAGCTGCTTTTCCTGGTACGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTATCTAACTTTGACTCGCAAGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATGAAGGTGGATGATGACCTAAAACAGCTTTTCCGGGGGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCACAAATGGAAGGCATTTCAACAAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAATTTAAATAATTCCTGA 780 0.4244 MAFQEKANRFKRQPEKNSSASNNGRTPGAVKFSTDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKIKYDGEKFSYKSKHDVRDKSQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQALKASREVWLLSNFDSQEDIAYPNDPKVPMKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00336 259 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 10 257 IPR016656 GO:0005673|GO:0006367
Phco4g00336 259 MobiDBLite consensus disorder prediction 208 259 - -
Phco4g00336 259 Pfam TFA2 Winged helix domain 2 113 170 IPR040501 -
Phco4g00336 259 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Phco4g00336 259 MobiDBLite consensus disorder prediction 14 30 - -
Phco4g00336 259 MobiDBLite consensus disorder prediction 1 30 - -
Phco4g00336 259 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00336 Phco-Chr4 2148436 2152360 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00336 4 2148436 2152360 Phco4g03259 4 53230174 53233376 PCT