Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03258 ATGGGAAGTCCTGATATTGAAAAGTCTGAAGAAACCAATACACAGATTGACAGTAACACAAATTCTAATTCCAAACAGCAGAGTGTAGAAAAAGCTGACGAACATCCTGAATGGTTACCTGATGGCTGGAACATGGAAGTCAGAATCCGTAAAAGTGGTTTGCACATGGGATCTGGATACAAGTGTTACATTGAACCACTGAAAGGATACAAATTCTTCTCCAAACCAGAGGTATTACGATATCTCGAAACAGTAAAGGACAGCAGTTGCACTTCCAAGAAGGGGAAGAAATGTAGTAAGATAAATACTCCAAATGACAAGAGTTGCACTTCCAAGGAGAAGAAATGCAGTAAAATGCAGACTCCAAACAACAAGAGCTGCAGTTCCAAGAAGGAGAAAAAAAGCACTGGCATGGAGTTTCAAAATGACAACAGTGACACTCCCAAGGAGGAGGAGAAGTACAGTAACATGGATTTTCCAAACAACAACAGTTGCGCTCCCAAGAAGGAGAAGGATGGGAGTAACTTGGATTCTTCCAACGAAAACAGTTGCACATCCAAGAAGGAGAAGATAGGCACTAACATGGATTCCCCAAAGGACAGCAGTTGCGCTCCAAAGAAGGAGAAGAATTGCAGTAACAAGGATTCTCCAATTGATATTGTGATTGAGAAGTCTATTGCGGAGGATTTACCACCTGGGTGGGTAAAAGAATTAAAGATTACGAAGAACAGCAAGGGCATTCGGAAAGATCCGTTTTATATTGATCCAGTGAGTGGATATGTATTCCGCTCTAAGAAGGATGTACTGCGGTATCTTGAATCTGGTGATGTACGGTCATGTGCCTTTAAGCCAAGTAGAAGACAAATCCAAGATGAAGACAACATAACTCCACCACCTGCTGCCAAGAGGCAGAAGCTGAAGCAGGCTGCACTCACACAACAGCTTTCTGCAGCCACGGAAATACTTGATAAAAGCCACTTAGAATTGCCAAGTGCTAACAGCCGAAGGAAAAAGCAAAATGCAAATGTTTCGTCTGGAACAAAGGTTGCTTCTGTTCCCATAGGTGATTCTGTTGTAAAGATGCATTCACTAGATGATGGAGCTGCAAACTCATCTGAATTGAAGAAAACATCTGACCCAGGTAGCGCAGCACTTTTGAAAAATGAATCCTTGAAGGAATCAGCAAAAGCACTTTCTGCAGATGATGTGCAAGAGAAGGACCTTGCTGTGAATACAATGGAGAATGGTAATGAGAAGAATCACAGTAACCACAGCATATCCAAAATCAGGAAGGAGTTCAATGTACGTCAGCGATCATCACCGAGACTTGCTGGAAGTAAATCTGTACAGTTGGTAAACAATGTGATGAATGAACAGACTCTTCAGGTTCCAAAAAGAAACTTGAGGAACAGTAGAAACAATCTAGATGTTGATACTTCTGTGGACCAAGCAGCTCCTAAAGAACAACCACATGAGCAAGAAACAGATAAAATAGCAGACAACAAGCCAGAAATTCAAATCAGATCAAATAAATCAGGTAAAAAGAAAGAGCACCACCTTCCTCGTCGTGCTTCAAAACGATTAGCTGCTATTGAGCATGAGTCAATGAACTCCAAAGTGGAATTGCAGCAAAATGACTGTGGCCCAATAAATGGAAAGTCAGCAAATAAAAGGGGAAAGTCTGAACCTCGTCTGGAGAAACGTGGAAAAGAAGAGATGGATGATGAGAGAACAGAACCTCGGCTGTCCTTTGCATATCACTATTCGTGGTCTGACCCAAGCTTGGAATATGCAATCAATGCCCTCACTGGTGTGTTACCACCAGCTGATAATATAACCAGTACTGCTGTTGCTGAAACTGATATTAAAAAAGCTTTGTTTAACAATCTTCCAGGAAGAAGCGCCACTGCAATCCCTGGAACTGATGCTCAAAACACTTCAGTTGGTAATGTTACGGGAAGTAGCACCACTGCAGTCCTTGAAACTGATATTCTAAAAGTGTCAGTTGAGAATGGTACAGGAAGGAGCACTACTGCAGTTCCTGAAACTGATATTCAAAAGGCTTCAGTTGACAATGGTACGGGAAGGAGCACCACTGCAGTCCCTGAAACTGATATTCAAAACACTTCAGTTGACATGGGCAGAAGTGCCACTTCAGTTCCTGAAACTGATCTTCAAAAAACTTTGATTGACAATGTTAAGGGAAGTAGCGTCACTACAATCCCTGGAAATGATGTTCAAAAAACTCTGGTTGAAAATGAATCAGTAAAAAGCACTTCTACAGGCCCTGAAACTGATATTCAAAAATCTTTGATTGACAGTGTTACAGGAAACAGGGACAGTGAAAATAATTTACTTGACACTGTTACGGGTAGCAGGGACAGTGATAACAATTTACTTGACACTGTTACAGGAAGCAGGGACAGTGAAAACAATTTACATGACACTGTTACAGATAGCAGGGATAGAAAATCCCAGGTACGTTCTAATAAACCCAAGAGAAAGAAAGAGCTCAAAGTACCTGTGCGATTATCAAAGCGACTTGCTGGCCTTGAACCTGAGTTACCGCCTGCTGAAAGAGCTCTTGAATATTCCACTAGAAAATCATGCAAAGAAGAGCCAACTGCCACTGCTACTTTAACTAATGGAGTGTCTGATTATCACGATGCTGGGGAAGAAACCAAGCTTACACTTATTCAAGCTTCAGATAGTTTGAAAACTGAAGTACTTGGAGAACCATTAAAACGGAGTGATAAGTCACATGATGCCCTAACCGATCACAAGGAACAATTGGGGAAAGTTGAAGCTGAAAATGTTGGTGATGTGAGATCAGAGCCACAGCTTCCCTTACCGTTTGGGGACTCTTGGTCAGATCCATGCCTAGAATTTGCTATCAAGACACTCACTGGTGCTTTTCCAGTTGATGTTGGTGGAGACATTATGCCTGCTTTGCCTCCTGGCTTTGATAATCCGCCATATAAGCAAGTGCATCGAAGTGTGGTGACCGACATTAATCAAGAAGCTCATGATAACTCGAACCAATCCTCGCACAATAAGGAGCTTAATATGGTTAGTCAACCTGAGTTGAGGACCGGCTCCACCTCTTATGAAAATGCTCCTAAGTTTACAACTAGAAATTTTGATCAATACAACATACTTAAGAATTTGGACGGGGAACCTAATATCGCTGGAAACATACCACAACCTGTGCATTATTCTAGGAATATAAACACACTAGCACATGAGCCATTAAAGCAAAATGGACAGGCAGTTGAGGGTGAAACTGTTACAACGGAGCAACAACTAATTGAAACTGGAGCTGTAAACCACGATAATTCGGAGTTACAGTATTGTGCACCGTTTATGAATTCTTGGTCTGACCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGTGTGATACCAGTAGAGGAAAATTTAACACTCCAAGGATGTTTCCCGGAACCTGCTAACTATCATGAACGGAGGGATGGTGTCTCATTGTTGCCAGATTTCAGATCTTCCAGCTTTTCACAAAGCGATTTCTCGTTTCTCCATGATACAGGGGTTAAGTCCATGCCGGGGCAGCAGTCATCAGTTAGCTCTTCATTCCTACCCTTGGAAAAAACAAGCCTTCAAGGTTTCGCTGGAGTTGATCCTCAAACACACTTTTCTCAGTGCAACAATAATTTTCAAAGAAGGTAA 3705 0.4178 MGSPDIEKSEETNTQIDSNTNSNSKQQSVEKADEHPEWLPDGWNMEVRIRKSGLHMGSGYKCYIEPLKGYKFFSKPEVLRYLETVKDSSCTSKKGKKCSKINTPNDKSCTSKEKKCSKMQTPNNKSCSSKKEKKSTGMEFQNDNSDTPKEEEKYSNMDFPNNNSCAPKKEKDGSNLDSSNENSCTSKKEKIGTNMDSPKDSSCAPKKEKNCSNKDSPIDIVIEKSIAEDLPPGWVKELKITKNSKGIRKDPFYIDPVSGYVFRSKKDVLRYLESGDVRSCAFKPSRRQIQDEDNITPPPAAKRQKLKQAALTQQLSAATEILDKSHLELPSANSRRKKQNANVSSGTKVASVPIGDSVVKMHSLDDGAANSSELKKTSDPGSAALLKNESLKESAKALSADDVQEKDLAVNTMENGNEKNHSNHSISKIRKEFNVRQRSSPRLAGSKSVQLVNNVMNEQTLQVPKRNLRNSRNNLDVDTSVDQAAPKEQPHEQETDKIADNKPEIQIRSNKSGKKKEHHLPRRASKRLAAIEHESMNSKVELQQNDCGPINGKSANKRGKSEPRLEKRGKEEMDDERTEPRLSFAYHYSWSDPSLEYAINALTGVLPPADNITSTAVAETDIKKALFNNLPGRSATAIPGTDAQNTSVGNVTGSSTTAVLETDILKVSVENGTGRSTTAVPETDIQKASVDNGTGRSTTAVPETDIQNTSVDMGRSATSVPETDLQKTLIDNVKGSSVTTIPGNDVQKTLVENESVKSTSTGPETDIQKSLIDSVTGNRDSENNLLDTVTGSRDSDNNLLDTVTGSRDSENNLHDTVTDSRDRKSQVRSNKPKRKKELKVPVRLSKRLAGLEPELPPAERALEYSTRKSCKEEPTATATLTNGVSDYHDAGEETKLTLIQASDSLKTEVLGEPLKRSDKSHDALTDHKEQLGKVEAENVGDVRSEPQLPLPFGDSWSDPCLEFAIKTLTGAFPVDVGGDIMPALPPGFDNPPYKQVHRSVVTDINQEAHDNSNQSSHNKELNMVSQPELRTGSTSYENAPKFTTRNFDQYNILKNLDGEPNIAGNIPQPVHYSRNINTLAHEPLKQNGQAVEGETVTTEQQLIETGAVNHDNSELQYCAPFMNSWSDPCLEFAFKTLTGVIPVEENLTLQGCFPEPANYHERRDGVSLLPDFRSSSFSQSDFSFLHDTGVKSMPGQQSSVSSSFLPLEKTSLQGFAGVDPQTHFSQCNNNFQRR 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03258 1234 MobiDBLite consensus disorder prediction 90 215 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 775 839 - -
Phco4g03258 1234 SUPERFAMILY DNA-binding domain 228 277 IPR016177 GO:0003677
Phco4g03258 1234 MobiDBLite consensus disorder prediction 326 349 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 1 27 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 177 200 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 127 156 - -
Phco4g03258 1234 SUPERFAMILY DNA-binding domain 22 91 IPR016177 GO:0003677
Phco4g03258 1234 Gene3D - 5 137 - -
Phco4g03258 1234 Gene3D - 192 318 - -
Phco4g03258 1234 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 108 IPR001739 GO:0003677
Phco4g03258 1234 MobiDBLite consensus disorder prediction 460 523 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 334 349 - -
Phco4g03258 1234 Pfam Methyl-CpG binding domain 35 91 IPR001739 GO:0003677
Phco4g03258 1234 Pfam Methyl-CpG binding domain 227 276 IPR001739 GO:0003677
Phco4g03258 1234 PANTHER OS04G0193200 PROTEIN 18 110 IPR038945 -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 775 811 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 536 578 - -
Phco4g03258 1234 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 220 287 IPR001739 GO:0003677
Phco4g03258 1234 MobiDBLite consensus disorder prediction 537 551 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 460 480 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 485 511 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 557 578 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 812 826 - -
Phco4g03258 1234 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03258 Phco-Chr4 53222655 53228418 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03258 4 53222655 53228418 Phco4g03258 4 53222655 53228418 ECH
Phco4g00337 4 2154631 2165431 Phco4g03258 4 53222655 53228418 PCT