Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03204 ATGCATTCACTAGCGCAACAGGTGCAGGAAAGCATCTGTGCAAATGACAAGAAAGCAGTGTACCAGCTTATTCTGAAGTCGGATGTTGACCTCAATGCCATCCGTTGGCAATCACTGTCTGGTGACTCTTTCGACATGGCATCTCAAACTGAAAATCAGCTCGTTGAGGACGAGAAAGATGGCTCTAGCGCGCTTCACTTGGCTTGCCTAACTAGTGACACTGGCATGGTGGAGCTACTCCTACAGCTTGGGGCAGATATAAATGCTTCTGATTCTAGAGGTCGAACACCACTTCATTGTTGTATTATTAAAGGACAGACTGCAGCTGCAAAAGCGCTTATCTTGAGGGGAGCCAATATATACATCGCAGATAAAGAAGGCAACACTCCTGTGAAGCTTGCATCAGAATCCGGCTGTTTTGACACTGAAATTATAAAACTCTTGACAAGCAGATAA 456 0.4518 MHSLAQQVQESICANDKKAVYQLILKSDVDLNAIRWQSLSGDSFDMASQTENQLVEDEKDGSSALHLACLTSDTGMVELLLQLGADINASDSRGRTPLHCCIIKGQTAAAKALILRGANIYIADKEGNTPVKLASESGCFDTEIIKLLTSR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03204 151 Gene3D - 99 150 IPR036770 -
Phco4g03204 151 ProSiteProfiles Ankyrin repeat profile. 60 92 IPR002110 GO:0005515
Phco4g03204 151 ProSiteProfiles Ankyrin repeat profile. 93 125 IPR002110 GO:0005515
Phco4g03204 151 Gene3D - 5 98 IPR036770 -
Phco4g03204 151 ProSiteProfiles Ankyrin repeat region circular profile. 93 125 - -
Phco4g03204 151 SMART ANK_2a 93 122 IPR002110 GO:0005515
Phco4g03204 151 SMART ANK_2a 60 89 IPR002110 GO:0005515
Phco4g03204 151 ProSiteProfiles Ankyrin repeat region circular profile. 60 91 - -
Phco4g03204 151 PANTHER CENTAURIN/ARF 6 149 IPR045258 GO:0005096
Phco4g03204 151 Pfam Ankyrin repeats (many copies) 62 114 IPR002110 GO:0005515
Phco4g03204 151 SUPERFAMILY Ankyrin repeat 13 149 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03204 Phco-Chr4 52758570 52761718 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03204 4 52758570 52761718 Phco4g03204 4 52758570 52761718 ECH
Phco4g03204 4 52758570 52761718 Phco7g01888 7 22165006 22173177 PCT