Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02985 ATGACAAGGTCTGTGTGTGAGTTATTGTATGAGCTTTATGCCAAGACAATAGTCCTTGTAACATACATGCTAATACAACTCATCCTTATCATTCGCTACCTTAAATCAAATACCCCTCCAATATCAACCACCCAATACCTCAGTTTCATCGAAGAGAAGAACCCTGCCATTCATTGCACCACAAGACTCAAGGCAGAACACATAGACTGCAGAGTCTGCCTCTCTGAATTCCAGGAGGGGGAGAAGGTCAGGAACCTCAACTGCAGACACACTTTTCACAAGGATTGCCTCGACCAGTGGTTGCAGCAATACTGTGCCACTTGCCCACTTTGCAGGCACAAGGTCTTGCCAGATCATGTTGTGGCCAACTACAACCTCCTTCAAAATCAGGTACAAGAAGAAGAAGAAGAGTATGATGGCAATGATCACCAACTCATCTTTTTGTTATCTGCATTAAGGGGTGGTAGCACTTTGCACACATATCTTTGA 489 0.4417 MTRSVCELLYELYAKTIVLVTYMLIQLILIIRYLKSNTPPISTTQYLSFIEEKNPAIHCTTRLKAEHIDCRVCLSEFQEGEKVRNLNCRHTFHKDCLDQWLQQYCATCPLCRHKVLPDHVVANYNLLQNQVQEEEEEYDGNDHQLIFLLSALRGGSTLHTYL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02985 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 117 IPR013083 -
Phco4g02985 162 ProSiteProfiles Zinc finger RING-type profile. 70 112 IPR001841 -
Phco4g02985 162 PANTHER - 4 157 - -
Phco4g02985 162 SMART ring_2 70 111 IPR001841 -
Phco4g02985 162 Coils Coil 124 144 - -
Phco4g02985 162 SUPERFAMILY RING/U-box 49 123 - -
Phco4g02985 162 Pfam Ring finger domain 69 112 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02985 Phco-Chr4 50978183 50978671 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02985 4 50978183 50978671 Phco4g02985 4 50978183 50978671 ECH
Phco4g02985 4 50978183 50978671 Phco2g02846 2 57708713 57709210 PCT