Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02846 ATGAGACCTCTCTCAAAGCTCTTTCACAGGTTTTGTGGGGAAATTGTAATCCTATTAGCATCCCTGATAATAGAACTTATCATTCTCATTCAGAAACTAAAATCATCGTCGTCTAGTCCAATCAGCACCCACCAATACCTCAAATTCATCGAGAAGAAGAACCCCACGATTTGCTACACCAAAAGGTTGTTGAAGGCAGAACAGGGTTGTGGAGCAGAGTGCAGGGTATGCTTGTGCGAATTGGAGGAAGGGGAGAAGGTGAGGAAGCTGCAATGCCATCACATGTTTCATAGGGATTGTTTGGACAAGTGGCTGCAACAATATTGGGCTACGTGCCCTCTTTGTAGGAAACAAGTGGTGCCGCCTGATGTTGTGTTGAAGCACCGTCAGCATCAGAATCAAGCAGAGGAACAAGGTTTTGATGGGAATCACGATGACAACCTTCTCTATTTTTTATCAGCATTTCGTCGTGGCAACACTTTGCATAGATACTTCTGA 498 0.4438 MRPLSKLFHRFCGEIVILLASLIIELIILIQKLKSSSSSPISTHQYLKFIEKKNPTICYTKRLLKAEQGCGAECRVCLCELEEGEKVRKLQCHHMFHRDCLDKWLQQYWATCPLCRKQVVPPDVVLKHRQHQNQAEEQGFDGNHDDNLLYFLSAFRRGNTLHRYF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02846 165 PANTHER - 1 159 - -
Phco2g02846 165 SUPERFAMILY RING/U-box 52 122 - -
Phco2g02846 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 122 IPR013083 -
Phco2g02846 165 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Phco2g02846 165 SMART ring_2 74 115 IPR001841 -
Phco2g02846 165 Pfam Ring finger domain 73 116 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02846 Phco-Chr2 57708713 57709210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02985 4 50978183 50978671 Phco2g02846 2 57708713 57709210 PCT