Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02912 ATGGTCCCATCAAAACCATGCCTCATTTTCTCATTGCACCATTTAATCATGCCACATTCTTTGCAAAAACAAATGCCAAATTTTCCACATTCAGAGAACACTACTTCACCCCCTCAATACCTTCCTTCTGTTCCACCAATGCCTCCTCAGCCTAAAATCCCAGATTCTCACCATATTACCCCAGAAGCTTCCCCTTTGATATTTGTGAAGGTATCCAAAAATTCCGTAGAAGAACATCATAAACATGTTGTTCAACTAGCGTTGATTGTGACGGCATGCATACTTGGCGTGTTCATGTTTCTGTTCACTGTGTCCACACTCATAAGGTACTTTTACTCCAGGAGATATAACCGCAATCCAAATGGAACAAGAGACACGCCCATATTGTTCGATTTGAACGGAGATTCTCCGACTTCCGATAACGATAATGACGTGGACCAAGACGACTTGGCGGCTGTCCACCATGTATGGTACATCCGCACCGTCGGTCTCCAACAATCGCTTATAGACTCCATCACCGTCTTCAAATACAGAAAAAACGAAGGAATCATAGACAGCTCCGAATGTTCCGTGTGCCTCGGAGAGTTCGAACACGACGACACTCTCAGACTGTTGCCCAAGTGCAGCCACGCATTCCACGTGCCTTGTATTGACACGTGGCTCCGGTCCCACAAAAACTGCCCCCTGTGCCGCGCACCTGTGGTCCGCGATGAAACTGGAGCCGTTGATCAGAATGTTCAGATGGATTCGAGCGTGTCTGATCATCAGAGTCAGGATCATGTGGTTCAGGTGCAGGATTCTGATGATGGGGTGGGATTAGAAGGTGGTGGTGGTTCTGGTGAGTCCTTTGGTGGAATAGAAACACAGCCTCTGAGGAGATCGGTTTCGATGGATTTTTCTTCTGCTTCAAATTCAATGGTGTTTCGTGATCTGGGGGTGGATATAGACACCCCTTATGGCGAAAAAGTGAGTTCGAGTAACAAGGGCATAATTCATATGAGTATTATTGAGAAACATGGAAGTGGGAGTTCGTGTTCGAGTTCGAGTTCAAGTACCATTCACAAGTTGGCTTCAGTTGGACGTGCGTTGCAAAAGGGTCCAATCTCAATGAGAAGATCGTTTTCACATAACAGGAAATTTTTGTTCTCCACACATTCCAGGAGTCAGAGTTCTACTCTTCCAATATAA 1188 0.4571 MVPSKPCLIFSLHHLIMPHSLQKQMPNFPHSENTTSPPQYLPSVPPMPPQPKIPDSHHITPEASPLIFVKVSKNSVEEHHKHVVQLALIVTACILGVFMFLFTVSTLIRYFYSRRYNRNPNGTRDTPILFDLNGDSPTSDNDNDVDQDDLAAVHHVWYIRTVGLQQSLIDSITVFKYRKNEGIIDSSECSVCLGEFEHDDTLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVVRDETGAVDQNVQMDSSVSDHQSQDHVVQVQDSDDGVGLEGGGGSGESFGGIETQPLRRSVSMDFSSASNSMVFRDLGVDIDTPYGEKVSSSNKGIIHMSIIEKHGSGSSCSSSSSSTIHKLASVGRALQKGPISMRRSFSHNRKFLFSTHSRSQSSTLPI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02912 395 ProSiteProfiles Zinc finger RING-type profile. 189 231 IPR001841 -
Phco4g02912 395 FunFam RING-H2 finger protein ATL54 164 237 - -
Phco4g02912 395 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 78 239 IPR044675 -
Phco4g02912 395 SUPERFAMILY RING/U-box 173 237 - -
Phco4g02912 395 SMART ring_2 189 230 IPR001841 -
Phco4g02912 395 MobiDBLite consensus disorder prediction 26 47 - -
Phco4g02912 395 Pfam Ring finger domain 188 231 IPR001841 -
Phco4g02912 395 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 239 IPR013083 -
Phco4g02912 395 CDD RING-H2_EL5-like 188 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02912 Phco-Chr4 50287027 50288214 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02912 4 50287027 50288214 Phco2g02902 2 58117776 58118705 PCT