Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02902 ATGACTAGTTTCCATTCTAGAAAACTATTTTTCCCCTTCCTTTGTTCAAGTGATGGTTCTACCATGAAAAGGAGAACCAGTTATAGTCCTATAGCTTCTCCTCTGCCCTCACCAGTCTCCCTTTCATTTCCATGGTCTCCACCACCCCTCCTTGAAGGAGATCACGAGCACCTAAACCTTGAACCTATCATTATAATTGTCCTAAGTAGCTTAACTTGTGTAATTATGTTTATCATCACCTTGTCCAAAATCCTAAGGTACCATTACTTAAATAGATACAACGTTAGCAGAAGAAACCCTCCAATATTATTTGACATTCGAGGAGATTCTCCCTTTTTTGATGATGAGGAACAGGAACAAGTTATCAGGCAGCAGTCCATATGGTTCAGCCCCACAGAGGGTCTCCAACAATCAACCATAGACTCCATCACAGTTTACAGATACAGAAATGATGAAGTGTTGGTTAAAGAAACTGAGTGTCTTGTTTGCCTAGGTGAGTTTCAACAAGAAGAGAGTCTGAGACTATTGCCAAAGTGTACCCATGCTTTCCACGTCCCTTGCATTGATACTTGGTTGAGGTCACATAAAACTTGTCCCTTGTGCCGCGCCCCTATTGTTCATGACATTGATAGTGTTGATGGTGGAACCGAGTCTGATTCAAGTGTTTCTGATATGATCGAGGACATGGAAGAATGTAGTAGTGGTGTAGTGAGGGTTGGTGATGAAGATTCTAGTGAAGAGGGGAGAGGTGATGGAATTGAAGTTTTGTCTGAATGTGGTGAGGTGAGTGATCATTCTTCAATTCTATTTAGTTTTGCTTCTGATCTTGGTACACAACCACAAGAATTTGACCATGAAAATGAACCCAAAATGAAGAGGTCTTTCTCAGTGGATTCATCTTCTGCTATGTGTCAGATAAACAAAGCTTAG 930 0.4097 MTSFHSRKLFFPFLCSSDGSTMKRRTSYSPIASPLPSPVSLSFPWSPPPLLEGDHEHLNLEPIIIIVLSSLTCVIMFIITLSKILRYHYLNRYNVSRRNPPILFDIRGDSPFFDDEEQEQVIRQQSIWFSPTEGLQQSTIDSITVYRYRNDEVLVKETECLVCLGEFQQEESLRLLPKCTHAFHVPCIDTWLRSHKTCPLCRAPIVHDIDSVDGGTESDSSVSDMIEDMEECSSGVVRVGDEDSSEEGRGDGIEVLSECGEVSDHSSILFSFASDLGTQPQEFDHENEPKMKRSFSVDSSSAMCQINKA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02902 309 SUPERFAMILY RING/U-box 147 209 - -
Phco2g02902 309 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Phco2g02902 309 Pfam Ring finger domain 159 202 IPR001841 -
Phco2g02902 309 MobiDBLite consensus disorder prediction 294 309 - -
Phco2g02902 309 FunFam E3 ubiquitin-protein ligase ATL6 123 208 - -
Phco2g02902 309 CDD RING-H2_EL5-like 159 202 - -
Phco2g02902 309 SMART ring_2 160 201 IPR001841 -
Phco2g02902 309 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 59 208 IPR044675 -
Phco2g02902 309 MobiDBLite consensus disorder prediction 279 309 - -
Phco2g02902 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 211 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02902 Phco-Chr2 58117776 58118705 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02912 4 50287027 50288214 Phco2g02902 2 58117776 58118705 PCT