Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02896 ATGTTGGGAGAAGACAGTAACAACGCCGAAACCGGTGTTCACTGGAGAGCACATTCCAGATCAGTTTCCTGGACCGACCAGACTGCGGTGACCCGGAAACCGCCGCGATCCCTTCAGCCTCTTTGCATCAGGAAACACAGCGTGAAGGAGTGGCCGAGCGCCGGCAGCGACGATCTCGGGGATTGGCTTCCGCCACCGACCCCAAGAGGGTCCACCAAAGGATCATCAAATTTGGGTTCGGGTTCGGGTCATGTTTTTCAGCTTAGGAGAGACAAGTTGGCTTTCTTCGACAAGGAATGTTCCAAAATCGCGGAGCACGTGTACTTGGGGAGTGACACGGTGGCAAAGAACGAGGAGGTTTTGCGGCAGCACGGGATAACGCACGTGCTGAATTGCGTGGGGTTCGTTTGCCCCGAGTATTTCAAAAGCAACTTTGTCTACAAAACGCTATGGCTGCGGGACAGTCCCTCGGAGGACATCACCAGCATTCTCTACGACGTTTTCGATTACTTCGAGGATGTCCGACAACAGGGTGGGCGCGTGCTCGTTCACTGCTGCCAGGGCGTGTCGCGCTCGACCTCCTTGGTCATCGCGTATCTCATGTGGAGGGAGAACCAGAGCTTCGAGGACGCGTTTCACTTGGTGAAGAACGCGCGTGGCATAACCAATCCGAATATGGGTTTCGCGTGTCAGCTGTTGCAGTGTCAGAAGCGCGTGCATGCTATGCCCCCGAGTCCTAGTTCTGTGCTGAGGATGTATAGGATGGCTCCTCATTCTGCCTACGACCCTCTTCACCTTGTTCCTAAGATCGTTAACCACCCTTGCGCCCACGCGCTTGATTCGCGTGGGGCGTTTATTGTGCATGTTCCTTCTACTTTATACGTGTGGGTTGGGAAGGAGTGTGGCACGGTGATGTGTTGCAAGGCGCGTTATGCAGCTGCTCAGGTTGTTCGATATGAGAGGGCAACTGGGAAGATTGTTAGTGTGGTTGAGGATGAAGAGCCTGAGGAGTTTTGGGTTGCTCTTTCTAACAAGGAAGTGTTGGTGGAGGATGAAGAAGAGGTGAAGAACGTGAAAACAATGGAGGTCGATGTGGGGGTTCATCCCCGGAGAGTTGAGGACTATGATTTGGACTTTGGAATTTTTCATAAGGCACTTGCAGGTGGGGTTGTTCCACCTTTTTCTTTCTCCAATGCTGGATCAGAAAATTGCCTCCCTTCTAAGGAAAATGGTTGGGGGAGATTGACTAGGAAGCTTACTACCGGTTGA 1269 0.5272 MLGEDSNNAETGVHWRAHSRSVSWTDQTAVTRKPPRSLQPLCIRKHSVKEWPSAGSDDLGDWLPPPTPRGSTKGSSNLGSGSGHVFQLRRDKLAFFDKECSKIAEHVYLGSDTVAKNEEVLRQHGITHVLNCVGFVCPEYFKSNFVYKTLWLRDSPSEDITSILYDVFDYFEDVRQQGGRVLVHCCQGVSRSTSLVIAYLMWRENQSFEDAFHLVKNARGITNPNMGFACQLLQCQKRVHAMPPSPSSVLRMYRMAPHSAYDPLHLVPKIVNHPCAHALDSRGAFIVHVPSTLYVWVGKECGTVMCCKARYAAAQVVRYERATGKIVSVVEDEEPEEFWVALSNKEVLVEDEEEVKNVKTMEVDVGVHPRRVEDYDLDFGIFHKALAGGVVPPFSFSNAGSENCLPSKENGWGRLTRKLTTG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02896 422 SMART dsp_5 99 238 IPR020422 GO:0006470|GO:0008138
Phco4g02896 422 MobiDBLite consensus disorder prediction 51 83 - -
Phco4g02896 422 ProSiteProfiles Dual specificity protein phosphatase domain profile. 99 241 IPR020422 GO:0006470|GO:0008138
Phco4g02896 422 MobiDBLite consensus disorder prediction 69 83 - -
Phco4g02896 422 SMART VILL_6 254 345 IPR007122 GO:0051015
Phco4g02896 422 CDD DSP 100 234 - -
Phco4g02896 422 Gene3D Severin 251 348 IPR029006 -
Phco4g02896 422 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 242 IPR029021 -
Phco4g02896 422 PANTHER MKPA PROTEIN 31 420 - -
Phco4g02896 422 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 158 219 IPR000387 GO:0016311|GO:0016791
Phco4g02896 422 Pfam Dual specificity phosphatase, catalytic domain 107 237 IPR000340 GO:0008138|GO:0016311
Phco4g02896 422 ProSitePatterns Tyrosine specific protein phosphatases active site. 183 193 IPR016130 GO:0016311|GO:0016791
Phco4g02896 422 Gene3D Protein tyrosine phosphatase superfamily 86 241 IPR029021 -
Phco4g02896 422 SUPERFAMILY Actin depolymerizing proteins 245 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02896 Phco-Chr4 50147235 50148503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02896 4 50147235 50148503 Phco4g02896 4 50147235 50148503 ECH
Phco4g02896 4 50147235 50148503 Phco2g02917 2 58196295 58198466 PCT