Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02917 ATGTTAGGCGAAGAGGGGAAGGACAAAGCCACCGGTGCTAGCGGTGTTGCATGGAAAATCTTTTCTCGTTCGGTTTCATGGACTGATAGGTCTCCTCAAAGCCGAAAGCCACCGACAAATAGCAAACCAAGACCACTATTGCCACCCCTTCAGCCTCTTTCGATCAACAAGCGCAACGTGGAGGAATGGCCTAGTGCCGGATCTGATGATCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGCTCCGTCAGAGCCAATGATTCAAGTCAACCCACCCAGGATTTTCTGTTCAAGAGGGAGAAATTGGCCTTCTTTGACAAGGAATGTTCCAGAATTGCTGAGCACATATACTTGGGGAGTGACACAGTGGCCAAGAACCATGAGCTCCTCAGGAAAAATGGAATCACTCATGTGCTCAACTGTGTCGGGTTTGTTTGTCCTGAGTATTTCAAAGGTGATTTTGTGTACAGGACACTTTGGTTGCAGGATAGCCCCACGGAGGACATCACAAGTATTCTCTATGATGTGTTCGATTACTTTGAGGACGTTCGAGAGCAAGGTGGGCGTGTCCTTGTCCATTGCTGTCAGGGGGTTTCTCGATCAACGACTTTGGTAATTGCTTATATCATGTGGAGGGAGGGGCAGAGCTTTGAAGATGCTTTTCAGTTTGTGAAGATTGCAAGGGCTGTGACCAACCCAAACATGGGTTTTGCCAGTCAACTTTTGCAGTGCCAGAAACGAGTCCATGCTATGCCTGCAAGTCCAAATTCTATTCTCAGGATGTACCGGATGACTCCTCATTCCCCCTATGACCCTCTTCATCTGGTTCCCAAGTTGGTAAACCAGCCAGGTGCACGAGCACTTGACTCTCGTGGGGCCTTCATTATTCATATTCCTTCTGCTATCTATGTTTGGAATGGGAAACATTGTAGCTCTGTGATGTCATGCAATGCAAGGAGCGCAGCCTTTCAGGTGATCCGTTATGAGAAGGCAAAGGGTCCAATTCTGAGCATCCATGAAGATGAAGAACCGCCTGGGTTTTGGATTGCTCTTTCTGATGAGCAACGCTTATCTGGTGATTCTGACAAAGATGGGATCATGGAGGAAGAACCAGTGTTGCCCTCTGAAGACATGGGGAGAAAAGTTTGCGCATATGATTTGGATTTTGAGATTTTCCACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTTTCCTTCTCTGATCCAGGATCGGAAACTTGTCTTCCTGCTAGAGAACATGGTTGGGCAAGACTGAGGCGGAAGTTTGCTAGTGGATTACTCACATCCCCCAGATTGGCCAGTGAAGCTGATTCAACCCCATGCAATGATCAATCCAGTGTAGTTGTGGAAGCTGAAAACCAACATACTGCAGATGAACCTTTGTCACCATCATCTATACATCCCTGTGGCTCACCAGATTCCTTTGAATGCTATCCAAATAGCAGCTTAGGTAGGGAAAAAGATAGTCATGAAGCCATGGATTTCTCTGTTCATGGTGTTTCTTCATCATTGCCTTTGTCTCCTCCTGGCACATCAAATCCTTTTCCTTGTTTTATAAGCTGCAGCCCAAAATTCAATTCCAAGTCTCCAACACTTTCACCTTCAAGTTCTGATTACGCCAGCTCATTTACTTTTTCACCTTCCTCTACCAATTGGTCAGACTTGTCCTTTGTGTCTTCTCGGCAGCCATCACCATCTGGCCTTGAATCAGCTGAACCCCTCTATGTTAAAGATGCATCTTTCTCTGAAAGTTCCTCTTTACTTCACAAAGAAGCTGTCTCTTCACCCTTGGAGGCATTTTCAGCTCATTACTCATTCGAAGGGGCAAACTCTAATTTGCCCTTGAAAGGTTCTTCCCTTTCCATTGCAGAGCGCAGGGGAAGTCATCCACCACCTCTGATGTTGCTATCCTCAGCCAGTGAGTCCTCTCACATCCCCAAGAACCTGGTAAGATCACTTTCAGGTCTTGAACCCAAGAGTGAAAATAGTTATAAAGAGGATCGTGGTACAGAGTTATGTAAAATGATGGCCGAGCTTGAGATATAG 2070 0.4643 MLGEEGKDKATGASGVAWKIFSRSVSWTDRSPQSRKPPTNSKPRPLLPPLQPLSINKRNVEEWPSAGSDDLGVWPLPQTPRGSVRANDSSQPTQDFLFKREKLAFFDKECSRIAEHIYLGSDTVAKNHELLRKNGITHVLNCVGFVCPEYFKGDFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTTLVIAYIMWREGQSFEDAFQFVKIARAVTNPNMGFASQLLQCQKRVHAMPASPNSILRMYRMTPHSPYDPLHLVPKLVNQPGARALDSRGAFIIHIPSAIYVWNGKHCSSVMSCNARSAAFQVIRYEKAKGPILSIHEDEEPPGFWIALSDEQRLSGDSDKDGIMEEEPVLPSEDMGRKVCAYDLDFEIFHKALAGGVVPPFSFSDPGSETCLPAREHGWARLRRKFASGLLTSPRLASEADSTPCNDQSSVVVEAENQHTADEPLSPSSIHPCGSPDSFECYPNSSLGREKDSHEAMDFSVHGVSSSLPLSPPGTSNPFPCFISCSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGLESAEPLYVKDASFSESSSLLHKEAVSSPLEAFSAHYSFEGANSNLPLKGSSLSIAERRGSHPPPLMLLSSASESSHIPKNLVRSLSGLEPKSENSYKEDRGTELCKMMAELEI 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02917 689 Gene3D Protein tyrosine phosphatase superfamily 84 251 IPR029021 -
Phco2g02917 689 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 168 229 IPR000387 GO:0016311|GO:0016791
Phco2g02917 689 ProSitePatterns Tyrosine specific protein phosphatases active site. 193 203 IPR016130 GO:0016311|GO:0016791
Phco2g02917 689 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 251 IPR020422 GO:0006470|GO:0008138
Phco2g02917 689 SUPERFAMILY Actin depolymerizing proteins 255 356 - -
Phco2g02917 689 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 105 251 IPR029021 -
Phco2g02917 689 PANTHER MKPA PROTEIN 27 656 - -
Phco2g02917 689 Gene3D Severin 261 359 IPR029006 -
Phco2g02917 689 Pfam Dual specificity phosphatase, catalytic domain 117 247 IPR000340 GO:0008138|GO:0016311
Phco2g02917 689 SMART dsp_5 109 248 IPR020422 GO:0006470|GO:0008138
Phco2g02917 689 MobiDBLite consensus disorder prediction 26 90 - -
Phco2g02917 689 CDD DSP 110 244 - -
Phco2g02917 689 MobiDBLite consensus disorder prediction 459 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02917 Phco-Chr2 58196295 58198466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02896 4 50147235 50148503 Phco2g02917 2 58196295 58198466 PCT