Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02878 ATGTTATCAGAACCACGTTCCCCATCTTCCCTCTCCACACCCACCACCATTCTCAGCTCACTCACCAACTCACCAATGGCAGCAACAATATCAGCAATGGCCATGATCAACGCCAAATGCCTCAACCCCACGTCACCAAAATTCCCCACCAAACTCACACCTTCAAAGCCTTCTCTCCTTTCTCTTCCCAAGGGCCTTATCGCCTCACCCGAAACCACCAACCTCTCCATTCCCACAGCCGTCGCGGGAGCCATATTCACGGCCCTCGGAACCTGCGACGCCGCGTTCGCCGCCCAGCAGATAGCGGATATAGCGGAAGGCGACAACCGCGGCCTGGCCCTGCTGCTGCCCATAATCCCAGCCATAGGGTGGGTGCTGTTCAACATCCTGCAGCCGGCGCTAAACCAACTCAACCGTATGCGCAGCACCAAAGGACTCATCATCGGGTTGGGTCTTGGCGGCTTGGCAGGACTCATGGCGGCGCCGCCACATGCAGCTGCCGCTGAAGTGGCATCGATCGCCGAAGCCGCAAGCGACAACAGGGGCCAGCTTCTGCTGTTTGTGGTGTCACCGGCTATTGTGTGGGTGCTGTACAACATCTTGCAGCCTGCTCTGAACCAGATCAACAGGATGAGATCCCAGTGA 645 0.5767 MLSEPRSPSSLSTPTTILSSLTNSPMAATISAMAMINAKCLNPTSPKFPTKLTPSKPSLLSLPKGLIASPETTNLSIPTAVAGAIFTALGTCDAAFAAQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGLIIGLGLGGLAGLMAAPPHAAAAEVASIAEAASDNRGQLLLFVVSPAIVWVLYNILQPALNQINRMRSQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02878 214 Hamap Photosystem II protein Y [psbY]. 108 142 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Phco4g02878 214 Pfam Photosystem II protein Y (PsbY) 179 211 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Phco4g02878 214 Pfam Photosystem II protein Y (PsbY) 108 140 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Phco4g02878 214 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 26 213 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02878 Phco-Chr4 50037016 50039055 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02878 4 50037016 50039055 Phco2g02931 2 58282607 58283194 PCT