Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02931 ATGGCAGCAACCATAGCAGCAACCATGGCCATAGTAAACACCAAGACCCTAAACCTTCAACTCCCACCTTCAAAACCCACCCTTTCTCTCTTTTCCCATCTCAACCTTCCAAAGGGTCTAACCTCCGCCATTAACGCCAACGTGTCAGCAACAACATCTTCCATGGCGGGCACTGCAATCGCGGGGGCAGTTTTTTCCACCCTCGGATACTGCGATGCGGCTTTTGCGGCGTCGCAAATAGCCCAAATAGCGGAGGGCGACAACCGTGGCCTTGCGCTGTTGCTGCCGGTGGTTCCCGCCTTAGCGTGGGTGCTGTTCAACATTCTGCAGCCGGCGCTGAACCAGCTGAACCGCATGCGGAGCAGCAAGGGGGTCATGGTTGGGCTTGGGCTTGGGCTCGGCACCTCGGGCTTGGTGTGGGGCCCGGAAGCGTCGGCGAGTGAGATGGGTCTGATTGCGGATGCTGCGGCAGGCAGTGACAACAGGGGTCAGCTTCTGCTGTTTGTGGTTGCACCGGCGATTGTGTGGGTTCTGTACAACATTCTGCAACCTGCACTTAATCAGCTTAACAGAATGAGATCAAAATGA 588 0.5629 MAATIAATMAIVNTKTLNLQLPPSKPTLSLFSHLNLPKGLTSAINANVSATTSSMAGTAIAGAVFSTLGYCDAAFAASQIAQIAEGDNRGLALLLPVVPALAWVLFNILQPALNQLNRMRSSKGVMVGLGLGLGTSGLVWGPEASASEMGLIADAAAGSDNRGQLLLFVVAPAIVWVLYNILQPALNQLNRMRSK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02931 195 Hamap Photosystem II protein Y [psbY]. 87 121 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Phco2g02931 195 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 195 IPR038760 GO:0009523
Phco2g02931 195 Pfam Photosystem II protein Y (PsbY) 160 192 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Phco2g02931 195 Pfam Photosystem II protein Y (PsbY) 87 119 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02931 Phco-Chr2 58282607 58283194 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02931 2 58282607 58283194 Phco2g02931 2 58282607 58283194 ECH
Phco4g02878 4 50037016 50039055 Phco2g02931 2 58282607 58283194 PCT