Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02828 ATGGGTAAGACTCCCTTTTCCTTCCGCCGCTCCGTTTCTCGCCGTCGGCCCAAGAAGACCACCGCGCCGCCCCAGCCTCGGTCCCCGCCACAGCCTCCCTACGCCGCCGGGATCACCGCCTCGCCGGATGACAACGCGAACAACCGCCTCGTCGCAGCCGCAGGTTCCAGCGCGTTGACAAAGGCGAAGAAGAAGACCGGCGGCGCCCGGCTCTGGATGAGGTTCGACCGGTCCGGCCGGTCCGAGCTCGTGGAGTGGGAGAAGAACGCCATCATCCGTCACGTCGGGATTCCCGCTCGAGACCTGAGAATACTTGGCCCCGTCTTCTCCCACTCCTCGAATATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCTATAGTGACGGCTGAAGAACTGTTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAGCAGCTTCCGGGCAAGAGTCAACTGAAACTTCTCGGTGCCGTGGAGGAGCAGGAAGGTGAAATGCAGGGTTCTAGTGGCGGACAATGGTTGCCTACGCCGGAGACTGCTGAAGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTATGTACTTATCTAGACTCCAATGTAGCAGACCTTGAGAGAGGTGCTTACCCTGTGTTGGACGAATTGGCCAGGAATGTTAGTACCAAGAATCTTGAACATGTGAGGAGTTTGAAGAGTAATCTCACGCGATTGCTGGCACGGGTGCAGAAGGTACGGGATGAAATTGAACATTTGTTAGATGACAACGAAGATATGGCACAACTATATTTGACAAGGAAGTGGCTGCTGAATCAACAATTTGAGGAGGCTCAATTAGGTGCCACAACCTCAAATAACCCTCCTAATTCTGCCCGTGCTATTCGTCGACTTGGTTCTAACAGAAGTGAAAGTCTTGTGACCAGTCATTATGAGGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTAGATGGAACTCGAAACAAGATATTATCCGTCAGGGAGTATATTGACGACACTGAAGACTATGTCAACATCCAACTCGATAACCATCGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCTTTTGTTATTGCTATTGATACTTTGATTGCTGGTGTATTTGGTATGAACATTCCTTGTAAATTATATGATATAGATGGAATATTTTGGCCCTTTGTTTGGATCACGTCTGCAGCTTGTGTACTCCTTTTCTTCGTTATTTTAGCATACGCAAGATGGAAAAAGTTGCTGGGATCATAA 1356 0.4882 MGKTPFSFRRSVSRRRPKKTTAPPQPRSPPQPPYAAGITASPDDNANNRLVAAAGSSALTKAKKKTGGARLWMRFDRSGRSELVEWEKNAIIRHVGIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEELLLLDPLRQEVLPFVEQLRQQLPGKSQLKLLGAVEEQEGEMQGSSGGQWLPTPETAEGLQSELPFEFQVLEIALEAVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLLNQQFEEAQLGATTSNNPPNSARAIRRLGSNRSESLVTSHYEDDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFVIAIDTLIAGVFGMNIPCKLYDIDGIFWPFVWITSAACVLLFFVILAYARWKKLLGS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02828 451 CDD Mrs2_Mfm1p-like 72 448 IPR039204 -
Phco4g02828 451 Gene3D Magnesium transport protein CorA, transmembrane region 145 382 - -
Phco4g02828 451 Pfam CorA-like Mg2+ transporter protein 328 442 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Phco4g02828 451 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 40 449 IPR039204 -
Phco4g02828 451 Coils Coil 248 282 - -
Phco4g02828 451 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 387 439 IPR045863 -
Phco4g02828 451 Gene3D Magnesium transport protein CorA, transmembrane region 389 449 - -
Phco4g02828 451 Gene3D - 57 143 - -
Phco4g02828 451 MobiDBLite consensus disorder prediction 1 46 - -
Phco4g02828 451 MobiDBLite consensus disorder prediction 22 36 - -
Phco4g02828 451 FunFam Magnesium transporter MRS2-1 60 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02828 Phco-Chr4 49628499 49631189 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02828 4 49628499 49631189 Phco2g02934 2 58296003 58313398 PCT