Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02763 ATGGACTCATCGTTTCTAGGCCCAAACCACCTAAACGACCAAAACGACGACGTTTTCCTTGACGCTCTACCTCACTGCCCCTTCCACCATTGTCTCGCTACCGCTGATACTTCACCGGAATCTTCCACCGATGCTTCTATTCTTTCCGACCTCAATCCTCCCTCTCCATCTCCGGAGACTACAATCCGCCGCCGTTCATCCCGCCGTCATTCTCCGGCCTGGGAACCCACGAAAACCGGTTCCGACGACACTTCGACCACCGTTCCCGGAACGAACCTAAGGAGCGATAGAAGCCTCGAAACTCCGAAAGAAAACGAGGATTCCCTCGAGAAATGCGATTCGAAACAAAAGAAACTTCGTCCCTCTCCATCTCCAAGCGTTGCCACCGAAGAGGGTGGCGAGGAATCGACGTTAACCGCCGCCGAGAATGACGACGGAGCCACCGATTCCGCGGACTCGGCCGTGGAACTCGGTAATCCCCCTATTAACTCTCTCGATTATATAACGGGGTTGGTGATTAGAGCAATTGTGTTCCAAATCAATGTTTTTTTTGTGTTAGTGAAATGCCCGATGTGGTTTATGATACACGCTTTCATGTTTTTTATGGATCCTTTTGGAGCAATTAGAAAGGGGAAGGGCTTGTTGGTGGATATTTTGGGTAGAGTGTTGTGTGGTGTTTTTGGCTGCATTGGTTCTTCAGCTCAGGGGATGTTAAAAGAGCACAAGTCTTTGTGGAATGTTGCATTTAGGTGTGGGTGGGGATTGTTGTGGTCAGTCTATGTTTGTTGCATTTTATTTGCTCTTTTGGTTTGTTCTCTTGTGGTGAGTGGGTTTTTGGTGAAGAGTTTGGTGGAGAAGCCTTTTCAGATGAGTCAGGGTTTTAACTTTGATTACACCAAGCAGAGTCCTGTTGCACTGGTGCCTGTAATGTCTTGTGATAATGTTGGGGGTGGGCATGATTCTGAGAGGAACGTTGCTGTTGGAGAGTGGATGGGTAGAAGGGTTATACCTGCTAAGCAGAAGGTGCAGGTCACTGTTTCATTGGTTGTGCCAGAGTCAGAATACAACACAAATCTAGGCATCTTTCAGATCAAGCTAGACTTCTTGTCTTTTGATGGCAAAACAATTTGGACTGCGAACCAACCTTGCATGTTAAAATTCATAAGCGAGCCTATCCGGCTAATGATGACATTCCTCAAGATTGTACCACTTGTCACTGGTTTTATATCAGAAACCCAGACACTGAATATCAGGCTGAGAGGTTTTGTTGAAGGGAATGTACCTACTTCTTGCTTAAAAATAACACTTGAGCACCGAGCAGAATATCCACCTGGTGCTGGGATTCCTCAAATATATGATTCATCAGTTATTATTGAATCAGAACTTCCCTTATTCAAGAGAATCTTATGGCATTGGAAGTTGAGCATATTTGTATGGATCTCAATGATGGTTTTCATGATGGAGTTACTATTTGTTCTAGTGTGTTGCTTGCCTATAATTATTCCAAGAACCAGGCAAGGGAGTGGTTCTGCTCCTGTTACTGGTACTTCAAGTTGA 1557 0.4547 MDSSFLGPNHLNDQNDDVFLDALPHCPFHHCLATADTSPESSTDASILSDLNPPSPSPETTIRRRSSRRHSPAWEPTKTGSDDTSTTVPGTNLRSDRSLETPKENEDSLEKCDSKQKKLRPSPSPSVATEEGGEESTLTAAENDDGATDSADSAVELGNPPINSLDYITGLVIRAIVFQINVFFVLVKCPMWFMIHAFMFFMDPFGAIRKGKGLLVDILGRVLCGVFGCIGSSAQGMLKEHKSLWNVAFRCGWGLLWSVYVCCILFALLVCSLVVSGFLVKSLVEKPFQMSQGFNFDYTKQSPVALVPVMSCDNVGGGHDSERNVAVGEWMGRRVIPAKQKVQVTVSLVVPESEYNTNLGIFQIKLDFLSFDGKTIWTANQPCMLKFISEPIRLMMTFLKIVPLVTGFISETQTLNIRLRGFVEGNVPTSCLKITLEHRAEYPPGAGIPQIYDSSVIIESELPLFKRILWHWKLSIFVWISMMVFMMELLFVLVCCLPIIIPRTRQGSGSAPVTGTSS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02763 518 MobiDBLite consensus disorder prediction 36 155 - -
Phco4g02763 518 MobiDBLite consensus disorder prediction 97 118 - -
Phco4g02763 518 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 163 511 IPR009617 GO:0019915
Phco4g02763 518 MobiDBLite consensus disorder prediction 77 96 - -
Phco4g02763 518 MobiDBLite consensus disorder prediction 119 133 - -
Phco4g02763 518 MobiDBLite consensus disorder prediction 62 76 - -
Phco4g02763 518 Pfam Putative adipose-regulatory protein (Seipin) 267 485 IPR009617 GO:0019915
Phco4g02763 518 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02763 Phco-Chr4 48970045 48972456 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02763 4 48970045 48972456 Phco4g02763 4 48970045 48972456 ECH
Phco11g00580 11 4026816 4029210 Phco4g02763 4 48970045 48972456 ECH
Phco4g02763 4 48970045 48972456 Phco11g00580 11 4026816 4029210 PCT