Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00580 ATGGACCGGCCAAGTTCGATCGATCAAGACGGCGACGTTTTCGTAGACGCGTGTCAACACTTCCCCGCCGAGGGCTCGCCGGAGCATTCCGATTCGGCTTCCAGGTTTTCCGATCCTCCGCCCGAACCTCAGTCATACTATCCGGCTGCCGCAATCCGACGCCGGCCAGTTCGTCGCGGTTTTGCGGGTACTCAATCGTCTGGTTCAAGCTTCGAGAGCGATTTGATCAATGGCGATTCGAGAAGGAGTTTCCGACACCGCACGAGACATAGAAATATCAAGAAAGACGTGAATTCGGAGAAACCCGATTCGGATGAACCGCAACAAGTTAATGCCTCGACGGAAGAGAACAACGAGGGCTCCACCGTAACTTCAGCTGCGAACGATGATGGAGCTGTCGACTCCGTTGACTCGGCGCCGCGACTCGGTGACTCTTCTTCGAGTTTCCTCGACCTCCCCGCGGGATCGGCGATTAACTTATTAGGGTTTCAGATGAAGTTAATGTTCATGTTCATAACTTACCCCCTGTTGTTCACGTTTTATTCATGCATGTTTTTCATGGATCCTTTGGGGACAACGAAGAGGGGCAAGGATTTCCTTATAGGAATTTTGAACAGAGGGTGGTGTTTATTGTTTCGGTGCATTAAGCCTTATGTAAGTAGATGTTTCAAGGAGAACGAATCGGTTTGGAGCGTGGCTTTTCGGTGGGGGTGGGGGTTCTTGTGCTCAATCTACGTTTGTTGCGTCATGTTTGGTCTTCTGGTTTCGTCGTTTGTGTTTAGTGGGTTTTTTATGAAGCATTTGGTGGAGAAGCCGATTCAGATGAGGGAGGTTTTGAACTTTGATTATAGCAAGCTTAGTCCTGTCGCGTATGTGCCGATAATGTCATGTGCTGGTGTTATTGGTGGTATAGGTTCCGAGGATAAGGTTCATGATCGGAAATGGGTGGGTGAACGGTTTATACCTTCTAAGCACAAGGTGCAAGCCACTGTTGAGTTAAGTGTGCCAGAGTCAGGATACAACAGAAACCTTGGGATGTTTCAGATCAGGGTAGATTTCTTATTGTCTAATGGTAAAGCTATTGCAAGCTCAAGTCAACCTTGCATGTTAAGATTCATAAGTGAGCCTATCCGCCTAATCACGACTCTCCTCAAGATTGCTCCTCTTGTTACTGGCTATACATCCGAAACTCAGACTCTGAATGTGAAGATGAGAGGTTTCGTAGAAGGAGATCTACCTACTTCGTGCTTGAAAGTGACCCTTGAGCAACGAGCAGAATATCAACCAGGTGCAGGGATTCCTGAAATATATGATGCATCTGTGATTGTTGAATCCGAACTTCCCTTGTTCAAGAGGATTATTTGGCTTTGGAAGATGAGCATATTTATATGGATCGCGATGATGGCGTTCTTCACAGAGCTACTTTTTGCTCTTGTCTGTTGTATGCCTATTATTATTCCGAAAACAAGGCAAAGGGTGGCTTCTGCTCGCCCTCCTGCAACAGTAAACCGTCCTCAGGCACTATATTGA 1530 0.4719 MDRPSSIDQDGDVFVDACQHFPAEGSPEHSDSASRFSDPPPEPQSYYPAAAIRRRPVRRGFAGTQSSGSSFESDLINGDSRRSFRHRTRHRNIKKDVNSEKPDSDEPQQVNASTEENNEGSTVTSAANDDGAVDSVDSAPRLGDSSSSFLDLPAGSAINLLGFQMKLMFMFITYPLLFTFYSCMFFMDPLGTTKRGKDFLIGILNRGWCLLFRCIKPYVSRCFKENESVWSVAFRWGWGFLCSIYVCCVMFGLLVSSFVFSGFFMKHLVEKPIQMREVLNFDYSKLSPVAYVPIMSCAGVIGGIGSEDKVHDRKWVGERFIPSKHKVQATVELSVPESGYNRNLGMFQIRVDFLLSNGKAIASSSQPCMLRFISEPIRLITTLLKIAPLVTGYTSETQTLNVKMRGFVEGDLPTSCLKVTLEQRAEYQPGAGIPEIYDASVIVESELPLFKRIIWLWKMSIFIWIAMMAFFTELLFALVCCMPIIIPKTRQRVASARPPATVNRPQALY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00580 509 MobiDBLite consensus disorder prediction 62 77 - -
Phco11g00580 509 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 145 505 IPR009617 GO:0019915
Phco11g00580 509 MobiDBLite consensus disorder prediction 1 137 - -
Phco11g00580 509 Pfam Putative adipose-regulatory protein (Seipin) 253 469 IPR009617 GO:0019915
Phco11g00580 509 MobiDBLite consensus disorder prediction 104 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00580 Phco-Chr11 4026816 4029210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00580 11 4026816 4029210 Phco11g00580 11 4026816 4029210 ECH
Phco11g00580 11 4026816 4029210 Phco4g02763 4 48970045 48972456 ECH
Phco4g02763 4 48970045 48972456 Phco11g00580 11 4026816 4029210 PCT