Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02528 ATGGCCGTAGCTGATCCCAAGCCTCACTCCGAACCTAAGGTCTGGAATTTCTTTAAGCTTCCCTTTCGCCATTCCACCTCTGCCACAACTACGACGTCGTCTTCTGCTAACCTTCACCTCCACCACCACCATCACCACCACAATCATAACAATCTTCCACTCGAGGGCTCCACTTCCAACACCTCCAGTTCCGTTTCCTCCGTTGCCAGATCGCTTCTCCCAACACGACGCCGTCTCAAGCTCGATCCATCCAATAAGCTTTACTTCCCTTATGAACCGGGCAAACAGGTTAGGAGTGCCATCAGGATTAAAAACACCAGTAAATCTCATGTAGCTTTTAAGTTCCAAACAACTGCTCCCAAAAGCTGTTTCATGCGTCCTCCTGGGGCTATTCTTGCACCTGGTGAGAGTATCATAGCAACAGTGTTCAAGTTTGTAGAGCAACCAGAAAATAATGAAAAGCCTGAAAAAACAGGACTGAAATTTAAAATCATGAGCTTGAAGGTGAAAGGATCAATTGATTACGTCCCTGAACTGTTTGATGAGCAGAAGGACCAAGTAGCAGTGGAGCAGATTTTACGAGTTGTTTTTCTAGATCCAGAGCGTCCTTCTCCTGCTTTGGAAAAACTGAACCGACAACTAGCGGATGCTGATGCTGCCCTTGAGGCACGTAAAAAGCCTGTGGAAGATGCAGGTCCAAAAATTATCGGGGAAGGGCTCGTCATAGACGAATGGAAAGAGAGGAGAGAAAGATACCTCGCAAAGCAGCAGGGTGAAGTGGTTGTAGATTCTGTATAG 798 0.4674 MAVADPKPHSEPKVWNFFKLPFRHSTSATTTTSSSANLHLHHHHHHHNHNNLPLEGSTSNTSSSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKPEKTGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPALEKLNRQLADADAALEARKKPVEDAGPKIIGEGLVIDEWKERRERYLAKQQGEVVVDSV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02528 265 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 198 IPR000535 -
Phco4g02528 265 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 77 256 IPR016763 GO:0005789
Phco4g02528 265 MobiDBLite consensus disorder prediction 39 64 - -
Phco4g02528 265 SUPERFAMILY PapD-like 67 208 IPR008962 -
Phco4g02528 265 Gene3D Immunoglobulins 74 202 IPR013783 -
Phco4g02528 265 Pfam MSP (Major sperm protein) domain 79 188 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02528 Phco-Chr4 46498156 46502052 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02528 4 46498156 46502052 Phco11g00332 11 2152275 2154802 PCT