Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00332 ATGACAATAGGTGAAGAAAGGCCAGAATCACAATCACAATCAGAAGGAAAAGTGTGGAATTTGTTGAAGCTTCCCTTTCGCCATTCAACTGCTTCAACCTCCAATTCCGTTTCTTCCCTTGCCAGATCCCTCCTCCCCACACCACGTCGTCTCAAGCTCGATCCTTCCCGCAAGCTCTACTTCCCTTATGAACCGGGCAAGCAGGCTAAGAGTGCCATCAGGATTAAAAACACCAGCAAATCAAATGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGCTGTTTCATGCGCCCTCCAGGGGGCGTACTTACACCTGGCGAGAGTATAATTGCGATTGTGTTCAAGTTTGTAGAGCATCCACTCAATAATGAAAAGCCAGAAAAAACTGGATTCAAATTTAAAATCATGAGCATGAAGGTCAAAGGATCAATTGAATATGTCCCTGAAATGTTTGGTGAGCAGAAGGATCAAGTAACAGTGGAACAGATTTTGCAGGTTATTTTTCTGGATCCAGAGCGTAGTAGTCCTGCTTTGGAAAAACTGAGGCTTCAGCTAGCTGAGGCTAATGCTGCAGTTGAGGCACATAAGAGAGCCCCAGAAGATGCAGATCCTAAGATTCTGGGAGAAGGGCTTGTCATAGATGAATGGAAAGAGAGGAGGGAAAGATATCTGGCAAAGCAGCAGGGTGAAAAGGTAATGGACTCTATATAG 714 0.4454 MTIGEERPESQSQSEGKVWNLLKLPFRHSTASTSNSVSSLARSLLPTPRRLKLDPSRKLYFPYEPGKQAKSAIRIKNTSKSNVAFKFQTNAPKSCFMRPPGGVLTPGESIIAIVFKFVEHPLNNEKPEKTGFKFKIMSMKVKGSIEYVPEMFGEQKDQVTVEQILQVIFLDPERSSPALEKLRLQLAEANAAVEAHKRAPEDADPKILGEGLVIDEWKERRERYLAKQQGEKVMDSI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00332 237 Pfam MSP (Major sperm protein) domain 51 159 IPR000535 -
Phco11g00332 237 Gene3D Immunoglobulins 47 174 IPR013783 -
Phco11g00332 237 SUPERFAMILY PapD-like 39 179 IPR008962 -
Phco11g00332 237 Coils Coil 179 199 - -
Phco11g00332 237 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 49 231 IPR016763 GO:0005789
Phco11g00332 237 ProSiteProfiles Major sperm protein (MSP) domain profile. 50 170 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00332 Phco-Chr11 2152275 2154802 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00332 11 2152275 2154802 Phco11g00332 11 2152275 2154802 ECH
Phco4g02528 4 46498156 46502052 Phco11g00332 11 2152275 2154802 PCT